Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0136 ATGGATTCAAGGTGGCCTCTTCATTCTTCTGAAAATAAACACCTTGCTCGAGAAACCAGAGACTTTGATCTCAACATTGCTGAAAATGAACCTCTAGATATGAGTCTAGGGTTCAATGCAACTGCTAATGCGCAATCTCATTCGAATTCTCCACAAGTCCCCATTTTAACAACTCAAAATCACTATCAAAATGTTGATGCCTCTTATTCACAGCAGGCAACAAACAATTTTCCCAGTTCTTCCTTGCTCATTCCTGGTTACTATGACTGCCTGAACCAGTGCTTCATTCCCTCTGCAACTGCAGTGTCACCGCCGCCAGTGAACAACTATTCAGTGTTTGGCAACCCTCTGAGAGGTCGTCAACTCGAGCCAGGCAGTTTAGGTCAGGATTATTATGAATGGCAAGTCATGCAAGTCAATAACTCTTCAATCCCAATTAGACGGTGTGCAAACTGCCACACAACTGATACACCAATGTGGCGGCGAGGGCCTGGAGAATTCATCGTCATCGGAGAGCAATATTCATCACAGCCATTAGAGTTCATTGTCATCGGAAAGCAATATTCATCACAGCCATTGCAGTCCACCGACAGTGAGAAAGGATCATCAGACACCCATTTTTGGACCTTCAGGATCTTCATATTCAAGTATGGAATCACCATTTTCCATTGGATATCCATTTTTCTGAGAGAACAAGAGATCACACCTTCATCACGATTCTTTTCTGGCGAGATTTTTCTGCCATTCCAGATCAGCGCTCACCAGTCTTTATCCTTATCTTGTCTTCAACTGGAGGGATCATCATACACCTCCATTGTCAAGTTTAAATTTGACATCAACACCACTACCAGAGAGGGATCACTTCGTTATCGGCTTCATTATCTCCTTCATCTCCACCATATTCGTGATCGCGCACAGTTCCGGAAGAAGAGATGA 936 0.4359 MDSRWPLHSSENKHLARETRDFDLNIAENEPLDMSLGFNATANAQSHSNSPQVPILTTQNHYQNVDASYSQQATNNFPSSSLLIPGYYDCLNQCFIPSATAVSPPPVNNYSVFGNPLRGRQLEPGSLGQDYYEWQVMQVNNSSIPIRRCANCHTTDTPMWRRGPGEFIVIGEQYSSQPLEFIVIGKQYSSQPLQSTDSEKGSSDTHFWTFRIFIFKYGITIFHWISIFLREQEITPSSRFFSGEIFLPFQISAHQSLSLSCLQLEGSSYTSIVKFKFDINTTTREGSLRYRLHYLLHLHHIRDRAQFRKKR* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0136 311 Gene3D - 146 179 IPR013088 GO:0006355|GO:0008270
Vvi6g0136 311 ProSiteProfiles GATA-type zinc finger domain profile. 147 164 IPR000679 GO:0006355|GO:0043565
Vvi6g0136 311 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 146 164 - -
Vvi6g0136 311 SMART GATA_3 143 182 IPR000679 GO:0006355|GO:0043565
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Vvi6g0136 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0136 - K17894 vvi:109122790 276.944