Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0133 ATGCGTTTTCCTTATGCAGATTTCGTTCTAATCACAAATTATTCCGAGCTCTATAAGAAGGACCATTTAGGCCTATACACTTCACAGATTTTTCTTCCTTCTTTGCATCTCTCCGCCATGGACTTCAGCATGCTTTCTTCCGATCATTTCGGTTTTGTTTGTGATCAGTATGAAAACCCTAGTAGTGACTTTCTTCCCTTAAGCTCATCTACCTTTGATCTTCACCATCTTCATGAAAGTGTCTTGGTAAGCCCTCACCTGACGAATCCGCCATTCCAGTGGTACGAAAACAACAGTTTCAGAAGCAGTTTCAATGGCCTGAACCATGTTGACAGCACCCTGGTAAGCCATCAACTGATCGTTGCTGATCACAATCATAATGAGCTTCAATGGCAGCAGAATCTCCACCACTTCAGTACTGCCCTCCAACGCCCACCCGCAACACTCCCTCAAGGCCAATTTGGAGCAAGTTTTGGCTCTCAGTGTGGAGTGATTGTTCGGCGGAGTGTTGTGGAGATGGTCACCTACCAACAAATCCAGTCTCTCCCCCATGTCACTGCTCCTTCCCCTTACTATCAAGCCCAGTCACCAACCCCACCAAAAAACTATATGCTGATGGAAGTTGAAGATGACGATGATTATGATATTAAACCTAATCTTCTCCATTTTCCAGCTCTGCCACAAAACAATTCCGTCTGTCTTCCTCAAGTGCTTCAAATTGAAGGCCAAAACCAGATGCCCGAAGACGATGACCCCAATGACAATAATGGTCATAAAAACCAGACGGATAAATATGGGACCAAGAGCCTGAAGCACCAGAAGTATGGGCCTTACACTTGTCCCAGATGTAAAATGGAGATCGAGACGTCCCAGAGCTTTGCTTCCCATATGAAGTCTCATTACAGCTCTGAAACTGAAGATGAGAGGAAGAAGAGGATAGAAGCCAAGTATAAGAAGAAGAATCTCCGGGTGGCCTACTCTTATGATGGACAACTTACCCTTGTCCCTGAGGAATGA 1017 0.4503 MRFPYADFVLITNYSELYKKDHLGLYTSQIFLPSLHLSAMDFSMLSSDHFGFVCDQYENPSSDFLPLSSSTFDLHHLHESVLVSPHLTNPPFQWYENNSFRSSFNGLNHVDSTLVSHQLIVADHNHNELQWQQNLHHFSTALQRPPATLPQGQFGASFGSQCGVIVRRSVVEMVTYQQIQSLPHVTAPSPYYQAQSPTPPKNYMLMEVEDDDDYDIKPNLLHFPALPQNNSVCLPQVLQIEGQNQMPEDDDPNDNNGHKNQTDKYGTKSLKHQKYGPYTCPRCKMEIETSQSFASHMKSHYSSETEDERKKRIEAKYKKKNLRVAYSYDGQLTLVPEE* 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0133 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 278 305 IPR013087 -
Vvi6g0133 338 MobiDBLite consensus disorder prediction 244 271 - -
Vvi6g0133 338 ProSitePatterns Zinc finger C2H2 type domain signature. 280 300 IPR013087 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0133 240 331 C2H2 Transcription Factor Family AT2G15740 42.391 1.55e-16 77.4
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vvi6g0133 None None None