Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0131 ATGGAGGGTAGTGCTTCAGGAAAGTTTAGTGGCTACTCATGTTTGTTCATGATCAGCTTTTTGATGGTGTGTTTGGGTGTGAGGTCCCAACTCACCACTGATTTCTACAATGAAAGCTGCCCAAACCTTCTGACGATCGTGAGAAAGGCGGTTAAGAATGCTATCAAGACGGAGACGAGAATGGCGGCTTCTTTGGTTCGACTTCACTTCCATGATTGCTTTGTGAATGGTTGCGATGGATCGGTTTTGCTAGATGGAAGTGATGGAGAGAAGTCTGCCTTACCCAACTTGAACTCAGTGAGAGGATTCGACGTTGTGGACACAATAAAAAGTTCTGTGGAGAGCGCATGTCCAGGAGTTGTTTCCTGCGCTGACATACTAGCCATAGCCGCCCGAGACTCCGTTCTCCTGAGTGTATCTGCAGGGATGAAACTAAGAAGAAATCCTTTGCAGAGTGGAGGAAATACATGGAAAGTATTTTTAGGAAGAAGAGATGGACTAGTTGCAAACCAGACAGGAGCAAATAATGGACTTCCTTTTCCAACTGATTCCTTGGATACAATCACTCAGAAATTTGCCAATGTCGGCCTCAATCAGACCGATGTCGTGTCGTTATCAGGTGCGCATACAATCGGATTAGCAAGATGTACTACCTTCAGCAGCAGATTGTTCAACTTCAGCGGAACAGGCGCTGCTGACTCTACAATGGACACGGAAATGGTGTCCGATTTGCAGACCTTATGCCCACAGAGTGGTGATGGGAACACGACAACCTCTCTCGACCAGAACTCAACCGATCTTTTCGACAACCATTACTTCAAGAACTTGCTCGTTGGGAAGGGTCTTCTTAGCTCTGATCAGATTCTATTTACTGGTGATGCAGCTGCTTCCACAACCAAAAGCCTTGTTCAAAACTACAGCAGTGACTCTGGCCTCTTCTTCTCCGATTTCACCAACTCCATGATCAAGATGGGGAATATCAACCCCAAAACTGGTTCCAATGGCGAGATTCGAACGAATTGCAGGGTGGTTAATTCATAA 1041 0.4601 MEGSASGKFSGYSCLFMISFLMVCLGVRSQLTTDFYNESCPNLLTIVRKAVKNAIKTETRMAASLVRLHFHDCFVNGCDGSVLLDGSDGEKSALPNLNSVRGFDVVDTIKSSVESACPGVVSCADILAIAARDSVLLSVSAGMKLRRNPLQSGGNTWKVFLGRRDGLVANQTGANNGLPFPTDSLDTITQKFANVGLNQTDVVSLSGAHTIGLARCTTFSSRLFNFSGTGAADSTMDTEMVSDLQTLCPQSGDGNTTTSLDQNSTDLFDNHYFKNLLVGKGLLSSDQILFTGDAAASTTKSLVQNYSSDSGLFFSDFTNSMIKMGNINPKTGSNGEIRTNCRVVNS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0131 346 Gene3D Peroxidase, domain 2 179 325 - -
Vvi6g0131 346 PANTHER PEROXIDASE 72-RELATED 28 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 Gene3D - 35 345 - -
Vvi6g0131 346 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 ProSiteProfiles Plant heme peroxidase family profile. 30 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Vvi6g0131 346 SUPERFAMILY Heme-dependent peroxidases 30 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 CDD secretory_peroxidase 30 344 IPR033905 GO:0004601|GO:0042744
Vvi6g0131 346 FunFam Peroxidase 34 195 - -
Vvi6g0131 346 Pfam Peroxidase 47 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Vvi6g0131 346 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0131 346 FunFam Peroxidase 179 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0131 Vvi-Chr6 1429376 1431556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0131 11 345 Peroxidase AT5G19890 60.896 4.61e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0131 K00430 - vvi:100253646 619.387