Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0127 ATGTCTCGAGTAGAGCATCTATGGGAGCGGTTGGTGCATGCAGCGCTAAGGAGTGAAAAGGCCGGGTTTGATGCATTTGGGCGGCCTGTTGGTGGCATTGCTGGAAATGTTCCATCTTCACTTGCAAAGAATAGGGACATAGATGCAATCTTAAGAGCTGCAGATGAAATACAAGATGATGATCCAAATGTCTCTAGAATCTTATGTGAGCATGCTTATTCATTGTCTCAAAATCTGGATCCTAATAGTGAGGGAAGAGGTGTATTACAGTTCAAGACTGGTTTAATGTCTGTAATCAAGCAAAAGCTAGCAAAAAAGGAGGGCGGAAGTATAGATAGAAGCCAAGACATTGCTTGCTTACAGGAGTTCTATAAGATCTATAGAGAGAAACATAAAGTAGATGAACTGCAAGAGGATGAAATGAAATTGAGGGAGTCTGGCGCATTCAGTGGAAATCTTGGAGAGTTGGAGCGTAAAACAGTGAGAAGAAGAAGAGTTTTTGCAACACTAAAGGTTATAAGGATGGTATTAGAGCAGCTGACTGAGGAGGTTTCTCCTGATGATGCAGAGAGGTCAATTCCTGAAGAGCTGAAACGGGTGATGGAATCAGATGCAGCCATGACTGAGGATCTAATTGCTTATAACATTATCCCTTTGGATGCTCCTACCATCACAAACGCAATTGTATCCTTTCCTGAGGTACAAGCAGCAGTATCAGCTTTAAAGTACTTCCAAGGCCTACCAAAATTGCCCGGGGACTTTTCTATACCTGCGACAAGGAACGCTGATATGCTTGATTTTCTGCAGTGCATTTTTGGATTTCAGAAAGACAATGTTTGTAACCAGCGTGAACATGTTGTTCATCTTCTTGCAAATGAACAGTCACAACTTCGTATTCTTGAAGAAACTGAACCGATATTGGACGAGGCTGCTGTGCGGAATGTATTCATGAAGTCCCTTGGAAACTACATTAACTGGTGCACCTACTTGTGCATTCAGCCAGCATTCAGCAATCCACAAGATGTCAATCGGGAAAAGATGTTACTGTTTGTGTCTCTAAACTTTCTGATATGGGGTGAAGCTGCGAACATTCGATTTCTCCCAGAATGCTTGTGCTACCTTTTTCATCATATGGTACGGGAGTTGGATGAAATGTTACGGCAGCAGATTGCCACTGCCCAACCAGCCAATAGCTGCAAATCAGAAAATGGTGTCTCATTCCTTGATCAAATTATTTCTCCTCTTTATGAAATTGTTGCAGCGGAGGCTGCAAACAATGACAATGGGCGAGCACCTCATTCTGCCTGGAGGAACTATGACGATTTTAATGAGTATTTTTGGTCACTTCATTGCTTTGAACTTGGCTGGCCCTGGAAGAAAGGTTCATCGTTTTTTCTTAAGCCCAAACCCAGATCAAAGAATCTGCTCAAGTCTGGTGGAAGCAAACATAGAGGAAAAACATCGTTTGTTGAGCATCGGACCTTTCTTCATCTTTACCATAGTTTTCATCGCCTGTGGATATTTCTTTTTATGATGTTTCAGGGACTCGCTATCATTGCATTCAATAATGGACATTTCAACTCGAAGACCATACGAGAAGTTCTCAGTCTCGGCCCAACTTTTGTTGTGATGAAGTTTTGTGAGAGTGTTTTAGACATTCTCATGATGTATGGTGCATATTCTACAACACGAAGTGTAGCTGTATCTCGAGTTTTTCTCCGTTTCCTCTGGTTTAGTGTTGCTTCAGTCTTCATATGCTTCCTTTATGTGAAAGCTCTTCAAGAAGAGAGTAAACTAAATGGAAATTCAGTTGTTTTGAGAATCTATGTTTTTGTTCTGGGCATCTATGCTGGTGTCCATATTTTTTTTAGTTCCCTAATGCGAATACCAGCATGCCACCAGCTGACTAATCGATGTGACCATTGGTTTTTAGTTCGCTTTGTGAAGTGGATGCACCAGATCAAGCCCCTGGTGGAACCAACACAGAAAATTGTGGGTTTCACTGATTTAAAATACTCTTGGCATGATCTTTTATCTAGAAATATATCTCTTGGATATCTATGTGTTTTATACCATTGTATCAGCTGTGGTGGGATTCCTGCTCGGTGCACGAGATCGTCTAGGGGAGGCAAGACTTCCCGTCAATCTTCTAGTGAGAATGTGGAGCAAGGCAAGTTTGATGCTGCTCGATTCTCCCCATTTTGGAATGAAATTATAAATAATTTAAGGGAAGAAGATTACATCAATGATTTGGAAAAGGAGTTGCTTCTTATGCCTAAAAATTCTGGAAAACTTCCCTTAGTTCAGTGGCCCCTTTTCCTTCTTAGCAGCAAGATATTTTTAGCAAAAGATATTGCAGTAGAAAGTAGAGGAGATTCTCAAGATGTTCTTTGGGAAAGGATTTGTAGAGATGACTACATGAAATATGCTGTTGAAGAGTGCTTTCACACCATTAAACTTATCCTGATGGAAATATTGGAAGGTGAAGGAAGGATGTGGGTGGATAGGTTGTATGAAGATATTCAAGGAAGTATAGCAAAGAAGAGTATTCATGTTGACTTCGAGCTAAGTAAGCTGCCACTTGTGATTTCAAGACTTACTGCCCTTTTGGGACCAATGAAAGAAGAGGAAAAGCCTGATTCTGTGAGTGGTGCTGTTAAAGCTGTTCAAGATCTCTATGATGTTGTGCGACATGATGTCCTTTCTATTAATATGAGGGATCATTATGAGACATGGAATCAGTTGTCAAAAGCAAGGACTGAAGGACGCTTATTTTCAAAGTTGAAATGGCCAAAAGATGCTGAGACGAGAGCACAAGTTAAAAGATTATGTTCACTTTTAACCATCCAAGATTCCGCTGCAAATATTCCCAATAATCTTGAGGCCAGACGTAGGCTGCAGTTTTTCACAAATTCCCTTTTCATGAAGATGCCTGCAGCTAAGCTAGTCCGTGAGATGTTGTCTTTCAGTGTGTTCACTCCATATTATTCTGAGACTGTGCTTTATAGTATGGATGAACTCCAAAAGAAAAATGAGGATGGAATATCAACATTGTTTTACCTCCAGAAAATTTTTCCAGATGAGTGGAAAAACTTTCTTGCTCGGATTAATCGGGATGAGAATGCACAAGATTCAGAACTTTATGATAGTCCTAGAGATGTCCTTGAGCTTAGATTTTGGGCTTCTTACCGGGGACAAACATTAGCAAGAACTGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTTCAGAGTTATTTGGAAAGGAATGCTGCTGGAGATGTTGAAGCTGCGATTTCTAGTGATGTTGCAACTGATACTCAAGGTTATGAGTTTTCTCCTGCGGCACGAGCTCTGGCAGATCTGAAGTTTACATATGTTGTTACATGTCAAATATATGGAATACAAAGAGAAGAGCAAAAACCTGAGGCTGTGGATATTGCATTGCTAATGCAACGAAATGAAGCTCTTCGAGTTGCTTACATTGATTCCGTTGAGACTCTGAAGGATGGTATAGTGCAGACAGAGTTCTATTCTAAACTTGTGAAAGCTGATATCAATGGGAAAGATCAGGACATATACTCTATCAAATTACCAGGAAATCCTAAACTTGGTGAAGGAAAACCTGAAAATCAAAACCATGCAGTTATATTTACTCGTGGAAATGCAATTCAAACGATTGACATGAATCAGGATAATTATTTTGAGGAAGCCCTGAAGATGAGAAATCTTCTTGAAGAGTTCCATACAGACCATGGCATTCGTCCTCCTACCATTCTTGGTGTTCGGGAACATGTCTTCACCGGAAGTGTCTCTTCTTTAGCCTTATTTATGTCCAATCAAGAAACTAGCTTTGTTACTCTAGGCCAGCGTGTTCTGGCAAAACCTTTAAAGGTTCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTCCATATAACACGAGGTGGTATCAGCAAGGCCTCTCGAGTTATCAACATTAGTGAAGATATATATGCTGGATTCAATTCAACATTGCGCCAAGGGAATGTTACTCATCATGAATATATTCAGGTTGGAAAAGGACGAGATGTTGGACTCAATCAGATTGCTCTATTTGAAGGGAAAGTTGCTGGTGGTAATGGTGAACAAGTTCTCAGTCGAGACATTTACAGACTTGGGCAGCTCTTTGATTTCTTCCGAATGATGTCATTCTACTTTACGACTGTTGGATACTATTTCTGTACTATGTTGACAGTGCTCACGGTATACGCTTTCCTTTATGGGAAGGCATATTTGGCACTATCTGGAATAGGAGAACAACTTCAAATAAGAGCACAGATATTGAACAACACTGCTCTGACCACGGCTCTCAATACACAGTTTCTTTATCAGATTGGTATGTTTACTGCTGTGCCAATGGTTTTGGGTTTCATCCTGGAGGAGGGTTTTCTAAGGGCTGTTGTCAGTTTTGTCACTATGCAGTTTCAGCTCTGTTCTGTCTTCTTCACTTTTTCTCTGGGCACAAGAACACATTATTTTGGTCGGACTATTCTTCATGGGGGTGCAAGGTATCAAGCAACTGGTAGGGGATTTGTCGTCCGCCATATTAAATTTTCTGAGAATTATCGGCTTTACTCCCGTAGTCATTTTGTTAAAGGATTAGAGGTTGTGCTTTTGTTGATAGTATACCTTGCATATGGGTATAACGAAGGCGCACTATCGTACATTCTTCTTAGCATTAGCAGTTGGTTCATGGCTCTTTCTTGGCTTTTTGCTCCCTATTTGTTCAATCCATCTGGTTTTGAGTGGCAGAAGACTGTGGAGGACTTTCGGGATTGGACAAACTGGCTTTTTTACAGAGGTGGAATTGGAGTTAAGGGAGGAGAAAGCTGGGAGGCTTGGTGGGATGAAGAACTGGCACATATTCGGACCTTTGGTGGGAGACTAGCTGAGACCATTCTGAGCCTAAGATTCTTTATCTTCCAGTATGGCATCATCTACAAGCTAGATGTACAAAGACAGAATACATCTTTAACGGTATACGGCCTATCATGGATCGTGTTGGCTGTGCTAATAATTCTCTTCAAGGTGTTCACCTTCAGCCAGAAGATCTCAGTGAACTTCCAGCTGCTGTTGCGCTTCATCCAAGGCATTTCATTACTGCTTGCCTTGGCTGGCATAGTCATAGCAATTGCAATGACACCTCTATCAATTACCGACATATTTGCTTGCATCTTAGCTTTTATACCTACTGGGTGGGGGATTATTTCGATTGCTGTGGCTTGGAAGCCTTTAATGAAGAAGCTGGGATTCTGGAAATCCATCCGCTCAATGTCCCGTTTATACGATGCAGGAATGGGAATGCTCATCTTCATTCCCATAGCCTTCTGCTCATGGTTCCCATTCGTATCAACATTCCAAACCCGGCTCATGTTCAACCAAGCATTCAGCAGAGGCCTGGAAATCTCTCTTATCCTCGCCGGAAACAATCCCAACACTGGAATATGA 5499 0.4119 MSRVEHLWERLVHAALRSEKAGFDAFGRPVGGIAGNVPSSLAKNRDIDAILRAADEIQDDDPNVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKKEGGSIDRSQDIACLQEFYKIYREKHKVDELQEDEMKLRESGAFSGNLGELERKTVRRRRVFATLKVIRMVLEQLTEEVSPDDAERSIPEELKRVMESDAAMTEDLIAYNIIPLDAPTITNAIVSFPEVQAAVSALKYFQGLPKLPGDFSIPATRNADMLDFLQCIFGFQKDNVCNQREHVVHLLANEQSQLRILEETEPILDEAAVRNVFMKSLGNYINWCTYLCIQPAFSNPQDVNREKMLLFVSLNFLIWGEAANIRFLPECLCYLFHHMVRELDEMLRQQIATAQPANSCKSENGVSFLDQIISPLYEIVAAEAANNDNGRAPHSAWRNYDDFNEYFWSLHCFELGWPWKKGSSFFLKPKPRSKNLLKSGGSKHRGKTSFVEHRTFLHLYHSFHRLWIFLFMMFQGLAIIAFNNGHFNSKTIREVLSLGPTFVVMKFCESVLDILMMYGAYSTTRSVAVSRVFLRFLWFSVASVFICFLYVKALQEESKLNGNSVVLRIYVFVLGIYAGVHIFFSSLMRIPACHQLTNRCDHWFLVRFVKWMHQIKPLVEPTQKIVGFTDLKYSWHDLLSRNISLGYLCVLYHCISCGGIPARCTRSSRGGKTSRQSSSENVEQGKFDAARFSPFWNEIINNLREEDYINDLEKELLLMPKNSGKLPLVQWPLFLLSSKIFLAKDIAVESRGDSQDVLWERICRDDYMKYAVEECFHTIKLILMEILEGEGRMWVDRLYEDIQGSIAKKSIHVDFELSKLPLVISRLTALLGPMKEEEKPDSVSGAVKAVQDLYDVVRHDVLSINMRDHYETWNQLSKARTEGRLFSKLKWPKDAETRAQVKRLCSLLTIQDSAANIPNNLEARRRLQFFTNSLFMKMPAAKLVREMLSFSVFTPYYSETVLYSMDELQKKNEDGISTLFYLQKIFPDEWKNFLARINRDENAQDSELYDSPRDVLELRFWASYRGQTLARTVRGMMYYRKALMLQSYLERNAAGDVEAAISSDVATDTQGYEFSPAARALADLKFTYVVTCQIYGIQREEQKPEAVDIALLMQRNEALRVAYIDSVETLKDGIVQTEFYSKLVKADINGKDQDIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHTDHGIRPPTILGVREHVFTGSVSSLALFMSNQETSFVTLGQRVLAKPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNSTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKAYLALSGIGEQLQIRAQILNNTALTTALNTQFLYQIGMFTAVPMVLGFILEEGFLRAVVSFVTMQFQLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNEGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQKTVEDFRDWTNWLFYRGGIGVKGGESWEAWWDEELAHIRTFGGRLAETILSLRFFIFQYGIIYKLDVQRQNTSLTVYGLSWIVLAVLIILFKVFTFSQKISVNFQLLLRFIQGISLLLALAGIVIAIAMTPLSITDIFACILAFIPTGWGIISIAVAWKPLMKKLGFWKSIRSMSRLYDAGMGMLIFIPIAFCSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI* 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0127 1832 Gene3D - 34 185 IPR023175 -
Vvi6g0127 1832 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 347 456 IPR026899 -
Vvi6g0127 1832 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 200 1825 - -
Vvi6g0127 1832 SMART FKS1_dom1_2 345 459 IPR026899 -
Vvi6g0127 1832 Pfam 1,3-beta-glucan synthase component 956 1647 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0127 Vvi-Chr6 1290612 1408591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0127 1 1832 Cell Wall Biosynthesis AT3G07160 71.228 0.0 2784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0127 K11000 - vvi:100232893 3555.38