Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0126 ATGTCTTCATCTCAGTTGCTAGCAGCAGCTCTCTTCTTAGCAGCTGTTCTTGGAGGTTCTAATGCTCAGCTCAGCGCGACGTTCTACGATACCTCGTGCCCAAATATATCTAGTATTGTGCAGGGTATCATTGAGCAGGCTCAGAACAGCGATGTTCGAATTAATGCCAAGCTGATTCGCCTCCATTTCCATGATTGTTTTGTCGATGGATGCGATGGATCGATTTTGCTGGACAATGCAGATGGTATAGCGAGCGAGAAAGACGCGAGCCCTAATATAAACTCAGTAGACGGATTCTCAGTAGTCGACGACATCAAAACCGCACTGGAGAATGTCTGCCCAGGCGTCGTCTCCTGCGCTGATATTCTGGCCATTGCATCCCAAATTTCGGTTTCCTTGGCAGGAGGTCCAACATGGCAGGTCTTATTCGGTAGAAGGGATAGTACGACAGCTTACCAAGCTGGGGCTAATAGCGATATCCCAACCCCACTTGAAACCCTTGAACAAATCACACAGAAGTTTACCAATAAGGGACTTGACTCCACTGATTTAGTCGCATTATCCGGTGCACATACATTTGGGCGCGCCCAATGCAGAACTTTCAGCCATCGCCTTTACGACTTTAACAACTCAAGCAGTCCTGATCCGACCATCGACGCAACATACCTGCAGACCCTTCAAGGAACGTGCCCTCAAGACGGAGATGGAACCGTTGTGGCGAATCTCGACCCCTCGACTCCAAATGGCTTTGACAATGACTACTTTACAAACCTTCAAAACAACCGAGGGCTTCTGCAGACTGATCAAGAGCTGTTTTCAACTACTGGGGCTGACACCATTGCCATTGTAAACCAGTTTGCCAGCAGCCAGAGTGAGTTCTTTGATGCCTTTGCTCATTTGTTTGACTGTGTGATTTAA 918 0.4793 MSSSQLLAAALFLAAVLGGSNAQLSATFYDTSCPNISSIVQGIIEQAQNSDVRINAKLIRLHFHDCFVDGCDGSILLDNADGIASEKDASPNINSVDGFSVVDDIKTALENVCPGVVSCADILAIASQISVSLAGGPTWQVLFGRRDSTTAYQAGANSDIPTPLETLEQITQKFTNKGLDSTDLVALSGAHTFGRAQCRTFSHRLYDFNNSSSPDPTIDATYLQTLQGTCPQDGDGTVVANLDPSTPNGFDNDYFTNLQNNRGLLQTDQELFSTTGADTIAIVNQFASSQSEFFDAFAHLFDCVI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0126 305 Gene3D - 28 160 - -
Vvi6g0126 305 ProSiteProfiles Plant heme peroxidase family profile. 23 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 Gene3D Peroxidase, domain 2 161 299 - -
Vvi6g0126 305 Pfam Peroxidase 43 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vvi6g0126 305 SUPERFAMILY Heme-dependent peroxidases 23 299 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PANTHER PEROXIDASE 72-RELATED 21 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 CDD secretory_peroxidase 23 298 IPR033905 GO:0004601|GO:0042744
Vvi6g0126 305 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0126 305 FunFam Peroxidase 161 302 - -
Vvi6g0126 305 FunFam Peroxidase 27 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0126 Vvi-Chr6 1267641 1274454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0126 6 299 Peroxidase AT5G06720 62.245 1.94e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0126 K00430 - vvi:100265513 582.408