Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0125 ATGAAAATGTGTTCTCAGGTAGTAGGGCTGCTCATCCTTGGTGTGTTTCTGCTTGGGGGATCACCTTCCTATGGTCAGCTGAGCCCAACGTATTATGACGATACGTGCCCAAATGCATCAAGTATTGTACGTGGGGTAATCCAGGAGGCTTTTATTTCGGATGTTAGGATAGGCGCCAGCCTCATTAGGCTTCATTTCCATGACTGCTTCGTCAATGGTTGTGATGGCTCGCTTTTGCTGGACAACACGGAAACCATAGTAAGCGAGAAAGATGCAATTCCAAATGCAAACTCAACGAGGGGCTTTGAGGTTGTTGACAGCATCAAGACCGCGCTGGAGAGCTCTTGCCAAGGCATCGTCTCCTGTGCTGATATTCTCGCCATTGCAGCTGAGGCATCAGTTAATATGTCAGGAGGTCCGTCGTGGACAGTTCTACTAGGAAGAAGGGATAGCAGAATAGCAAACCAATCTGGTGCCAATACCGCCCTTCCAAATCCCAGACAAAACATTACTACGCTCAAGGCTGTGTTTGAAGCAGTTGGCCTTAACACTACCACTGATTTGGTTGCACTATCTGGTGCTCACACATTTGGAAGGGCTGCATGCCGATTTTTCAGCGATCGTATATACAATTTCAGTGGCACAGAAAGTCCTGACCCGTCGCTGAACTCATCTTACTTAGAGACACTAAGCGCATTATGCCCTCAAGATGGGGATGGGACTGTCCTAGCTGACCTTGACCCTACGACACCAGATGGTTTTGACAAAAACTACTTTTCTAACCTTCAAGAGAACCGAGGCCTGCTGCAGAGTGATCAGGAGCTGTTTTCAACTACTGGGTCAGATACAATTGATATTGTTAATTTATTCGCCAGTAATGAAACTGCTTTCTTTGAGAGCTTTGTTGAATCCATGATAAGAATGGGGAATATCAGCCCATTAACAGGGACTGAAGGTGAGATCCGATTGGACTGCAGGAAGGTTAACAACGATTCATCAGGATCAGCTGATGTTTTGGTTAGCTCAATTTGA 1032 0.4622 MKMCSQVVGLLILGVFLLGGSPSYGQLSPTYYDDTCPNASSIVRGVIQEAFISDVRIGASLIRLHFHDCFVNGCDGSLLLDNTETIVSEKDAIPNANSTRGFEVVDSIKTALESSCQGIVSCADILAIAAEASVNMSGGPSWTVLLGRRDSRIANQSGANTALPNPRQNITTLKAVFEAVGLNTTTDLVALSGAHTFGRAACRFFSDRIYNFSGTESPDPSLNSSYLETLSALCPQDGDGTVLADLDPTTPDGFDKNYFSNLQENRGLLQSDQELFSTTGSDTIDIVNLFASNETAFFESFVESMIRMGNISPLTGTEGEIRLDCRKVNNDSSGSADVLVSSI* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0125 343 FunFam Peroxidase 30 175 - -
Vvi6g0125 343 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 PANTHER PEROXIDASE 72-RELATED 26 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 FunFam Peroxidase 164 308 - -
Vvi6g0125 343 Pfam Peroxidase 43 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 Gene3D - 31 329 - -
Vvi6g0125 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vvi6g0125 343 Gene3D Peroxidase, domain 2 164 308 - -
Vvi6g0125 343 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g0125 343 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Vvi6g0125 343 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0125 Vvi-Chr6 1261853 1263321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0125 9 329 Peroxidase AT5G06720 64.506 6.69e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0125 K00430 - vvi:100260291 671.003