Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0029 ATGCGTCTATCACCACCAGCAAGCGGCTCTTTCAGAGAGGCTCTAGTTGATTTTTCCTATGCTGGTTATAATATTCCCAAGGGATGGAAGCTCTACTGGGGTACTGGTTCAACACAGAGGGATCCAGCTTTCTTCCGAAATCCAGATAACTTTGATGCTTCAAGGTTTGAAGGAGCAGGACCTGCCCCATTTTCATATGTTCCGTTTGGAGGGGGGCCTAGGATGTGTTTGGGACAAGAGTTTGCTCGGCTACAAATACTTGTGTTTATGCACAACATAGTGAAAAGGTTCACTTGGGATTTACTGAATCCTGATGAGAAAATTGAGCACAGTCCCATGCTTGCACCATTGGAAGGACTTCCTATCCGTCTTCATCCTCATTGA 384 0.4557 MRLSPPASGSFREALVDFSYAGYNIPKGWKLYWGTGSTQRDPAFFRNPDNFDASRFEGAGPAPFSYVPFGGGPRMCLGQEFARLQILVFMHNIVKRFTWDLLNPDEKIEHSPMLAPLEGLPIRLHPH* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0029 127 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 69 78 IPR017972 GO:0005506|GO:0016705
Vvi6g0029 127 SUPERFAMILY Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0029 127 PRINTS E-class P450 group I signature 76 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0029 127 PRINTS E-class P450 group I signature 34 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0029 127 PRINTS E-class P450 group I signature 66 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0029 127 Gene3D Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0029 127 Pfam Cytochrome P450 1 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0029 127 PANTHER CYTOCHROME P450 26 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0029 Vvi-Chr6 391295 391874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0029 1 127 Cytochrome P450 AT3G19270 42.520 1.08e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0029 - K20667 gmx:100808690 219.164