Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0017 ATGGGGATTCAGGGAATTACTCTAAACCACATAAAAAGCCATCTTCAGAAGTACAGAATGAGTGAGCATTTCCTTGGACAAGCTAGTACTGAGAACACAAGGAATGTGACTGGAGACAGGAGGTTTGAAGCCAATGGAGAGAGTATCTACAAAATACCCCTAGGTTCCCACACAAATAAAAGCTTACAGAAGAGTACAGCACTACAGATGCTAATTGAAGTGCCGAGAAGACCCCATGAACAGCTTGAGCAAAATAGCAGACAGTTGACATGGAACATTGAATGA 285 0.4211 MGIQGITLNHIKSHLQKYRMSEHFLGQASTENTRNVTGDRRFEANGESIYKIPLGSHTNKSLQKSTALQMLIEVPRRPHEQLEQNSRQLTWNIE* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0017 94 Gene3D - 1 23 - -
Vvi6g0017 94 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 89 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0017 Vvi-Chr6 290507 291199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0017 1 83 G2-like Transcription Factor Family AT3G04030 44.944 1.57e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0017 - - vvi:100260393 169.474