Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0006 ATGATGAACATGGATACGAGAAAACCTGTTGGTAACCTTGCTGAATCGATTCGTTCTCTCTTAGGATTAAAGGCAAATCTTACTTCCAGCTGGGCTGATTCGGTTAGTGATATTATAAAGAGTTTACCATCAGAAGAACCACGCACTGATAGGATAAAACCTGCAAAGTCCGAAACAACAAATTCCTTTGATGACAAAGAGGTTAATTCAGGCACTATTATTTTGAAGCTTAAAGATGAACTTGCTGCCTTAACTGCATACATAAACCAGTTGAACATTCAGAGAAGGCAGGTTCTAAATGAATTTCTGGACTTGAAAGGGAACATTCGAGTGTTTTGTAGAATCAGACCCATCACTGTGGGGGAGAATTCCAGCCATTTAAGTACCGTCGTAACTTTAGATTCAAGTAATGCGCTGCTAAAACTTGCTGAGAATAAGAGTAAACGTTACAGCTTTGACAAGGTTTTCCACCCGGGTTCATCACAAGATGATGTCTTTTTGGAAGTTGAGCCAGTCATCAAAACTGCCCTGGATGGCTACAATGCATGCATCTTTGCATATGGGCAGACAGGCACAGGGAAAACTTACACAATGGAAGGTACTCCGGATTGTCCAGGAGTAGTGCCCCGCGCAATGGAGGTTCTGTTTAAGCAAGCAGTGGATAGTAACCATGCTTTTCTCTTCAGTTTCAGTATGCTTGAGATTTACTTGGGAAATCTCAAAGACTTGCTTGTCCCTCAGTCAACAAAAGTAACAGATCCCCTGCCACCAAGGTAA 777 0.4183 MMNMDTRKPVGNLAESIRSLLGLKANLTSSWADSVSDIIKSLPSEEPRTDRIKPAKSETTNSFDDKEVNSGTIILKLKDELAALTAYINQLNIQRRQVLNEFLDLKGNIRVFCRIRPITVGENSSHLSTVVTLDSSNALLKLAENKSKRYSFDKVFHPGSSQDDVFLEVEPVIKTALDGYNACIFAYGQTGTGKTYTMEGTPDCPGVVPRAMEVLFKQAVDSNHAFLFSFSMLEIYLGNLKDLLVPQSTKVTDPLPPR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0006 258 Pfam Microtubule binding 90 244 IPR031852 GO:0008017
Vvi6g0006 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 249 IPR027417 -
Vvi6g0006 258 ProSiteProfiles Kinesin motor domain profile. 108 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi6g0006 258 Coils Coil 74 94 - -
Vvi6g0006 258 Gene3D Kinesin motor domain 52 255 IPR036961 -
Vvi6g0006 258 SMART kinesin_4 106 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi6g0006 258 PANTHER KINESIN-LIKE PROTEIN KLP-3 49 249 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0006 Vvi-Chr6 136959 138531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0006 58 250 Calmodulin-binding Proteins AT5G65930 36.735 3.71e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0006 - - vvi:100257047 508.449