Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1697 ATGTTGAAGCGTTCGAGTAGGCAACACGAATCCCTCTCTGACAAGATCTACAGATTTCGAGGCGTAATCCTAGTGATCTCGATCCCACTGCTACTTATCTCCTTTGTTCTCTTCCTCATGCCCACCACCACGACTTCTCGCTCCGGTGCCTTCCAGCAATACCCCTTAGTCCACCGCAAGGCTTCTCCTCACTCCCAATCTAGGACCTACGCCGTCATCTTCGATGCGGGCAGTTCTGGCAGCCGTGTCCACGTTTTCTGCTTCGACAGCGATTTGAATCTTGTCCACATTGGAAAAGATCTCGAGCTCTTCTTGCAGAGAAAACCAGGTTTAAGCGCATATCCAACGGAACCCCAGCAAGCTGCAGAATCTCTGCTGCCCCTTCTAGATAAAGCTGAAAATGTTGTTCCAGCAGATTTGCGTCGCAAGACACCGGTCAAAGTTGGGGCAACTGCTGGTTTAAGGGCATTGGGAATTGATGCATCTGATAGAATTTTGCAAGCGGTCAAGAATTTTCTTAAAGACAAAAGCACCCTGAAATCCAAGCCAGAATGGGTCACCGTCTTAGATGGATCGCAAGAAGGTGCTTTTCAGTGGGTGACCATAAACTATCTATTAGGGAATTTGGGAAGGAAATACTCTCATACAGTTGGAGTGGTTGATCTTGGAGGTGGTTCTGTTCAAATGGCATATGCCATCTCAGAGACAGCTGCTGAAAAGGCTCCAAAGATCTCAGATGGAGAGGACACATATGTTAAGGAAATGTACCTCAAAGGAACAAAATACTTCCTCTATGTTCACAGTTATTTGCACTATGGTCTATTAGCAGCTCGAGCAGAGATTCTTAAGGTTGAAAGTTCTGAGAATCCATGCTTGTTGGGTGGTTTTCATGGGACATACACATATGGAGGAGTGACTTATGAAGCATCAGCTCACCCAAGCGGCTCAAGCATGGAAAGATGCAGGAGGGTGGCTTTTAGGGCTCTCAAAGTTAATGAATCAACATGTACCCACATGAAATGCACATTCGGTGGGATATGGAATGGAGGAGGGGGGGATGGACAGAAGAATTTGTTTGTTGCTTCATTTTTCTTTGACAGAGCTGCTGAGGCTGGATTCGTTGATCGCAACCAGCCTGTAGCCAAAGTTCAGCCTATGGATTTTGAGGATGCAGCCAAGCGAGTGTGCGAGACTAAACTTGAAGATGCCAAATCTAAATTTCCACTTGTGGAGGAGGCCAACCTGCCATACTTATGCATGGATCTCGTCTATCAGTTCACATTGCTAATAGATGGATTTGGCCTAGATCCCTGGCAAGAAATTACATTGGTGAAGCAGGTTAAATATGGCGATGCCCTTGTTGAAGCAGCATGGCCACTAGGGAGTGCCATTGATGCCGTGTCATCATTAACATAG 1416 0.464 MLKRSSRQHESLSDKIYRFRGVILVISIPLLLISFVLFLMPTTTTSRSGAFQQYPLVHRKASPHSQSRTYAVIFDAGSSGSRVHVFCFDSDLNLVHIGKDLELFLQRKPGLSAYPTEPQQAAESLLPLLDKAENVVPADLRRKTPVKVGATAGLRALGIDASDRILQAVKNFLKDKSTLKSKPEWVTVLDGSQEGAFQWVTINYLLGNLGRKYSHTVGVVDLGGGSVQMAYAISETAAEKAPKISDGEDTYVKEMYLKGTKYFLYVHSYLHYGLLAARAEILKVESSENPCLLGGFHGTYTYGGVTYEASAHPSGSSMERCRRVAFRALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFVDRNQPVAKVQPMDFEDAAKRVCETKLEDAKSKFPLVEEANLPYLCMDLVYQFTLLIDGFGLDPWQEITLVKQVKYGDALVEAAWPLGSAIDAVSSLT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1697 471 Gene3D - 70 464 - -
Vvi5g1697 471 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 189 204 IPR000407 GO:0016787
Vvi5g1697 471 Gene3D Exopolyphosphatase. Domain 2 190 448 - -
Vvi5g1697 471 CDD NBD_sugar-kinase_HSP70_actin 72 231 - -
Vvi5g1697 471 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 469 IPR000407 GO:0016787
Vvi5g1697 471 FunFam Apyrase 1 190 448 - -
Vvi5g1697 471 Pfam GDA1/CD39 (nucleoside phosphatase) family 64 469 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1697 Vvi-Chr5 24920330 24924684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1697 3 469 Calmodulin-binding Proteins AT3G04080 68.443 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1697 K14641 - vvi:100267968 919.072