Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1658 ATGCTAAGTGACAATATCCTTGACCGCTGCTATGCCCACAGAAGATACGAGGTTAGGAAGACGATTACAAATGTGTATAACAAGATTGGCACACCCATGGACATTGGCAAATTGTCATTTCAGACTGAACTCAATGTCATGACACGGTCTATGTGGGGCGACACCATTGAAGGCCAGGAGGAAAGTTTGACTGGAGTTTCCTTCCGCGAGTTGGCAAATGAAATGATTGGATTGTTGGGAAAGCCAAACATCTCTGATTTTTTTCCGGTGCTTGCCAGGTTTGATATACAAGGCGTGGAGCGAGAAATGAAGGTGGTCTTCCACTTTGTTGATCAGATCATGGATCACATCATCGAACAAAAGATGAAACTGAACACTGCAAAAGAAGAAAGGGCCTCTAACAACAGAGAAGAGAAGGATTTTCTGCAGCTCCTCTTGGACGTCAAGGAGCAGGAAGATGCTGAAAAACCAATCACCAGGACACAAATCAAGGCATTGTTAGTGAACATCCTGGTAGGCGGGACTGACACAACAGCAACAACAACGGAGTGGGCGATGGCAGAGATGATGAGTAATCCAGAGATAATGAGGAAAGCCCAAGAAGAGTTGGCAGAAGTTGTTGGGATGACCAACATTGTGGAAGAGTCCCACCTACCCAAACTAAAATGTAACAACCTGCACCCAACCATATAG 693 0.4517 MLSDNILDRCYAHRRYEVRKTITNVYNKIGTPMDIGKLSFQTELNVMTRSMWGDTIEGQEESLTGVSFRELANEMIGLLGKPNISDFFPVLARFDIQGVEREMKVVFHFVDQIMDHIIEQKMKLNTAKEERASNNREEKDFLQLLLDVKEQEDAEKPITRTQIKALLVNILVGGTDTTATTTEWAMAEMMSNPEIMRKAQEELAEVVGMTNIVEESHLPKLKCNNLHPTI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1658 230 Gene3D Cytochrome P450 1 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1658 230 PRINTS E-class P450 group I signature 182 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1658 230 PRINTS E-class P450 group I signature 162 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1658 230 PRINTS E-class P450 group I signature 42 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1658 230 Pfam Cytochrome P450 17 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1658 230 PANTHER OS08G0547900 PROTEIN 1 222 - -
Vvi5g1658 230 SUPERFAMILY Cytochrome P450 2 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1658 Vvi-Chr5 24512416 24513445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1658 1 230 Cytochrome P450 AT4G12300 43.154 4.76e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1658 - - vvi:100242139 369.007