Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1655 ATGGACCGTCTGTATAAGAGTGTTTTGCATTTAGGAAATTTATTCAAGCCACAGCTGTTTGAACTTTTCCTTTTCAATTCCACGACCATGATATCATACCATTTGAATAAGGCTACAGAAACAATTTGCAGTCTCTGGTCATGGTGGTGGGCAGGTAGCAACAAGAAATTAGATGTAGTAGATGGAGCAGTTCTCACAGTTTCTGTTGCTGTACTTGCAATCTTATGGTACTTACGTACATCAAGGAAAGGAACAGCTCCATGGCCGCCGGGTCCTCGTGGCTTGCCGGTTGTTGGATATCTCCCTTTTCTGGGCAGCAACCTTCATCATTCATTTGCAGAATTGGCTCATCTCTATGGCCCAATCTTCAAGCTCTGGCTTGGAAACAAGCTTTGTGTTGTGTTGAGTTCCCCGTCCCTAGCAAAACAAGTGGTCCGCGACCAAGACATCATATTCGCTAACCGTGATCCGCCAGTTGCAGCATTCGCCTACACATATGGTGGACTCGACATTGCATGGTCTCCCTATGGCTCCTACTGGCGCAATCTGCGAAAGGTGTTTGTGAGAGAAATGCTGAGTAACACTAGCCTTGAAGCTTGTTACCCACTTCAAAGGTCCGAAGTCAGAAAGGCTATTACCAATGCGTATTCCAAAATTGGCACACCTATGGACATTGGCCAATTGTCGTTCCAAACTGTTGTTAATGTCACGCTGAGTTCCTTGTGGGGCAACACCCCTGAAGCCCACAACGATGGTAAAATTGGAGCCGAGTTTCGGGAGGCGGCGTCTGAAATCACTGAATTGTTGGGAAAACCAAACATCTCCGATTTTTTCCCGACGCTTGCTGGGTTTGATATACAAGGGGTGGAGCGGCAAATGAAGAGAGCCTTCCTCTCGGCTGAACAGGTTATCGATTCCATCATCGATCGAAAGATGAAAAAAAGTACTGCTAAAGAAGAGGGGGCATCTGACAACGGAGAAAAGAAGGATTTTCTGCAGTTCCTTTTAGATCTCAAGGTGCAGGAAGACACTGAAACACCGATCACCATGACACAAATCAAGGCCTTGTTGATGGACATCTTGGTAGGCGGAACAGACACAACAGCCACAATGGTCGAGTGGGTGATGGCGGAGATGATTCGAAATCCGGTGATAATGACAAGGGCACAAGAAGAATTAACAAATGTTGTAGGGATGGGCAGCATTGTGGAAGAGTCACATCTGCCTAAATTACAGTACATGGATGCAGTTATCAAGGAGTCACTCCGATTACACCCAGCACTCCCACTCCTGGTCCCCAAGTGTCCAAGCCAAGATTGCACAGTGGGTGGGTACACTATAGCAAAAGGTACTAAGGTATTTTTAAATGTCTGGGCAATACATAGGGATCCACAGATTTGGGATAGTCCTTCTGAGTTCAAGCCAGAGAGGTTCTTGAGTGAGCCTGGTAGATGGGACTACACAGGCAACAATTTCCAATATCTTCCATTTGGATCAGGGAGAAGAATATGCGCAGGGATCCCTCTGGCAGAAAGAATGATAATATACTTGTTGGCATCACTTCTGCATTCATTCAATTGGCAGTTGCCGGAAGGTGAAGACCTTGACCTTTCAGAGAAGTTTGGGATTGTCCTAAAGAAGAGAACACCACTAGTTGCTATCCCCACAAAAAGGCTTTCCAGCTCAGATCTCTATCTTTAA 1701 0.4591 MDRLYKSVLHLGNLFKPQLFELFLFNSTTMISYHLNKATETICSLWSWWWAGSNKKLDVVDGAVLTVSVAVLAILWYLRTSRKGTAPWPPGPRGLPVVGYLPFLGSNLHHSFAELAHLYGPIFKLWLGNKLCVVLSSPSLAKQVVRDQDIIFANRDPPVAAFAYTYGGLDIAWSPYGSYWRNLRKVFVREMLSNTSLEACYPLQRSEVRKAITNAYSKIGTPMDIGQLSFQTVVNVTLSSLWGNTPEAHNDGKIGAEFREAASEITELLGKPNISDFFPTLAGFDIQGVERQMKRAFLSAEQVIDSIIDRKMKKSTAKEEGASDNGEKKDFLQFLLDLKVQEDTETPITMTQIKALLMDILVGGTDTTATMVEWVMAEMIRNPVIMTRAQEELTNVVGMGSIVEESHLPKLQYMDAVIKESLRLHPALPLLVPKCPSQDCTVGGYTIAKGTKVFLNVWAIHRDPQIWDSPSEFKPERFLSEPGRWDYTGNNFQYLPFGSGRRICAGIPLAERMIIYLLASLLHSFNWQLPEGEDLDLSEKFGIVLKKRTPLVAIPTKRLSSSDLYL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1655 566 PRINTS P450 superfamily signature 363 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 116 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 415 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 140 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 352 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 372 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PRINTS E-class P450 group I signature 456 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 CDD CYP76-like 116 555 - -
Vvi5g1655 566 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506|GO:0016705
Vvi5g1655 566 FunFam Cytochrome P450 82C4 78 556 - -
Vvi5g1655 566 Pfam Cytochrome P450 89 549 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 Gene3D Cytochrome P450 74 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1655 566 PANTHER OS08G0547900 PROTEIN 45 565 - -
Vvi5g1655 566 SUPERFAMILY Cytochrome P450 89 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1655 Vvi-Chr5 24497287 24499201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1655 65 566 Cytochrome P450 AT4G12320 52.871 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1655 - K20770 vvi:109122654 1084.71