Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1654 ATGCTGAGCAGCGCGACTCTCGACGTCTTCTATGACCTCCGCCGCCAGGAGTTCCAGCGGACGGTGAGATATCTGTACGGTCAAGCAGGATCACCGGTAAACGTGGGAGAGCAAATGTTTTTGACTGTAATGAACGTGATAACGAGCATGTTGTGGGGTGGGACGGTGAAGGGGGAAGAGAGAGCGAGCCTTGGGGCAGAGTTCAGGCGAGTGGTGGCAGCGATGACGGAGTTGATGGGGAAGCCCAATATATCTGATTTTTTTCCAGGATTGGCCCGGTTTGATTTGCAAGGCATTAGAAAACGGTTTGGAGAATGTGCTCTGAAGTTTGAAGGAATATTTGATTCAATTATCCAACAGAGAATGAAGATTGATAAAGAAGGTGGAAACGGAGGTGGGAAGGATTTTCTGCAGTTTCTATTGAGGCTCAAAGATGAAGGACACGCCAAGACGCCTTTGACAATGAACCACGTCAGGGCCCTACTCTTGGATATGGTGGTGGGTGGAACCGATACCACGTCTAACACAGTTGAGTTCGCCATGGCTGAAATGATGAACAAACCAGAGGTGATGAGAAAAGCACAACAAGAATTGGAGGTAGTGGTTGGTAGAGACAAGAAAGTAGAAGAATCCCACATCGGAAAACTGCCATATTTATATGCAGTCATGAAGGAAGTTTTGCGGTTGCACCCAGCGCTCCCTCTGTTAGTTCCTCATTGTCCAAGTGAATCATGCGTTGTGGGAGGTTATACCATTCCCAAGGGGGCTCGAGTCTTTGTTAACGTGTGGGCAATACACAGAGACCCATCAATTTGGAAATCCCCATTGGAGTTTGATCCGGAGAGGTTTTTGAGAGGGACATGGGACTACAGTGGAAAAGATTTCAGTTATTTTCCGTTTGGCTCAGGCAGAAGAATATGTGCAGGTATAGCGATGGCTGAAAGAATGGTGATGTTTTCTCTTGCGACACTTTTGCACTCTTTTGACTGGAAATTGAGGGAAGAGAAGTTAGATCTTTCGGAGAAGTTTGGAATTGTGTTGACAAAGAAGATGCCTCTTGTGGCCATCCCTACACCAAGATTATCTCACCCATTACTCTATGAGTATGAGTAG 1113 0.4663 MLSSATLDVFYDLRRQEFQRTVRYLYGQAGSPVNVGEQMFLTVMNVITSMLWGGTVKGEERASLGAEFRRVVAAMTELMGKPNISDFFPGLARFDLQGIRKRFGECALKFEGIFDSIIQQRMKIDKEGGNGGGKDFLQFLLRLKDEGHAKTPLTMNHVRALLLDMVVGGTDTTSNTVEFAMAEMMNKPEVMRKAQQELEVVVGRDKKVEESHIGKLPYLYAVMKEVLRLHPALPLLVPHCPSESCVVGGYTIPKGARVFVNVWAIHRDPSIWKSPLEFDPERFLRGTWDYSGKDFSYFPFGSGRRICAGIAMAERMVMFSLATLLHSFDWKLREEKLDLSEKFGIVLTKKMPLVAIPTPRLSHPLLYEYE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1654 370 Pfam Cytochrome P450 10 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 FunFam Putative cytochrome P450 superfamily protein 159 358 - -
Vvi5g1654 370 SUPERFAMILY Cytochrome P450 2 360 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 Gene3D Cytochrome P450 1 362 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PANTHER OS08G0547900 PROTEIN 1 368 - -
Vvi5g1654 370 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 300 309 IPR017972 GO:0005506|GO:0016705
Vvi5g1654 370 PRINTS E-class P450 group I signature 297 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS E-class P450 group I signature 307 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS E-class P450 group I signature 177 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS E-class P450 group I signature 157 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS E-class P450 group I signature 42 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS E-class P450 group I signature 261 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS P450 superfamily signature 168 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS P450 superfamily signature 298 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1654 370 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1654 Vvi-Chr5 24490412 24491947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1654 1 367 Cytochrome P450 AT4G12320 59.249 8.42e-166 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1654 - - vvi:104879497 748.043