Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1653 ATGGCCCATGTCAAGGCCTTGCTCACGGGCATGGTGGTGGGCGGAACTGACAGCACATCTAATACACTTAAATTTGCCATTGCTGACATGATGAACAAACCAGAAGTGATGAAGAAGGCACAGCAAGAATTAGACGTGGTAGTTGGCAAGGATAGCATAGTAGAAGAGTCTCACATTTATAAATTACCATATTTATCTGCAGTGATGAAAGAGGCTATGCGGTTGCACCCAATGCTCCCTCTAATGGTTCCGCATTACCCAAGTGAAACATGCGTTGTTGGAGGTTATACCATTCCAAAGGGGGTTCGAATCTTTGTTAACTCCCAAAGTAGGGCGCATTAA 342 0.4474 MAHVKALLTGMVVGGTDSTSNTLKFAIADMMNKPEVMKKAQQELDVVVGKDSIVEESHIYKLPYLSAVMKEAMRLHPMLPLMVPHYPSETCVVGGYTIPKGVRIFVNSQSRAH* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1653 113 PRINTS E-class P450 group I signature 66 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 PRINTS E-class P450 group I signature 3 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 PRINTS E-class P450 group I signature 23 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 FunFam Uncharacterized protein 1 113 - -
Vvi5g1653 113 Pfam Cytochrome P450 2 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 PRINTS P450 superfamily signature 14 31 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 PRINTS P450 superfamily signature 67 78 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 PANTHER OS08G0547900 PROTEIN 1 108 - -
Vvi5g1653 113 SUPERFAMILY Cytochrome P450 3 109 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1653 113 Gene3D Cytochrome P450 1 113 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1653 Vvi-Chr5 24482971 24489603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1653 3 110 Cytochrome P450 AT4G12300 67.593 1.72e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1653 - - jre:109011249 176.022