Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1619 ATGTTGCCTGTTTGTTCAGCCACCACTAGCTGTTCTTCTCATTCTCAGATTTCCTTCCATGGAGGGTCACGATCCTTTTCTCCATCCCGGAAGACTTTTGAGATTAGATGCCTTGCGGAAGACAGGGTTGTTTTAGGCTTGTCAAGTGGAGTTCATGCTCATGGAGTTTCCTTAAAAGCACAAGTTTCAAAATTGTCTAATTCTAGTTTTGTTGACAGTATTGAAAAATCAAGCTCTACAGAGCCTACCAGCATTTTTTCCTGCCCAAATGTATTTGACGGCCTTGAATGCAGATCCACTGATAAGTTTGTGGACAGTTCTGGTCTGTCTGGCACAGAAGAGAAGCTAGTGGACTACATGGACCAGTTAACTGAAAATGCAAATATTTTATCAGGAGCTCCTAATCTAGAAACCATATCAACCACTGATATCATTCCAAATAATCCCAACTCAGTATCTGACTCCTTTGGCATGGATAACGGTTCATTATCCAGTTTGAAAACCAATGCAGGAGACCTTTTTTCAGGGATCAATGAGTCCATAGGCAGTTCTGTTGATAAGGGACAAAGTGCTGTAAAAACCTCACTGGATACAATTACGTCTTCAATAACATCTGCTATCAATAGTGCTACTGATGCTGTTGATACTGCTGTTAGTAAAGTGTTTTCAAGTGTCGACCAAGCGGGGGAATTGGCTAATGATAGAGTGGTGAGCTTCTCAAATGACTTGAAGGAGGCCACTAGTAAAGTGGGTGCTACTGCTATTGATGTTTTAAGACATGGTATTGTTCTAGTGGAGGATTCTTTAGCAAATGGGGCCAGTTTTGCTGCTTATTCTTATGGATCTGCTAAGGAGTTGCTTCCTACAGAGATCCGGAATGTGGTAAATTTGTCTGAAGAGAAAGTATTAGAAATCTTGAGGCCTGCTGGCGCAGCCTTGCAACAGTTCTATGTTGCTGTTGAGGGGTTGGAGAGAAACCTTGGTTTGGATCCCAGTGATCCAATTGTGCCTTTCGTTCTTTTCCTTGGAACCTCAGCCACTTTGTGGGTTTTTTACTGGAGACTAACTTATGGTGGTTATTCTGGTGATATATCACCTCAATTGACATTGGAGCTCTTGAAAGGGAAGGAGAATGTTGTACTAGTTGATGTCCGGCCTGAGGATCTGAGGGAAAGGGATGGAATTCCTGATCTTCGGCGAGCAGCTCGATTTCGATATGCAAGTGTAACTCTACCTGAGTTCAACAGCTCTGTACGAAAGTTATTGAAGAGTGGAAGAGACCTTGATGACTCCTTGATTGCTGCTGTCATTCGGAACTTAAAGATTGTTCAAGACAGGTCCAAGGTCATAGTTCTGGATGCTGATGGTAGTCGTTCCAAAGGCATTGCAAGATCTTTGAGGAAACTTGGGGTTAAGAGGCCATACCTGGTCCAAGGTGGCTTTCAGTCTTGGGTGAAACAGGGTTTCCGTGTTAAAGAGCTCAAACCTGAGACAACACTTACCATACTTAATGAGGAAGCAGAGGCAATCATAGAAGATATCAATCCTACTCCAGTAAAACTTCTTGGATATGGTGTGGGTCTTATTGCGGCAGTGTATGCATCAATAGAGTGGGAAAAGACACTACAATTTATTGGCATTTTTGGCCTTGGTCAGACCATTTATCGGCGAGTTGCTGCTTATGAGGGACCTGAAGATTTTAAGCAAGACGTGAGGTTGTTGCTCACTCCTGTTAGACTTGGAGCTCAAGCATATTCATGGGCTGCCGGGAAATTAGAATCAAATGGCATTGGACTACCAACATCTCCTTCATCCTTAGATGTTCAAAACCGGGTATTGCAGGCAGCTGCAAAACATGAATCTCAGCCCTCCGACACTGAAGAAACACAAGACCCATTTCCAGATTCAGCGGGTGCTGTTACTGAGAGTGTAGACCTCTCTGAAGCATAG 1950 0.4333 MLPVCSATTSCSSHSQISFHGGSRSFSPSRKTFEIRCLAEDRVVLGLSSGVHAHGVSLKAQVSKLSNSSFVDSIEKSSSTEPTSIFSCPNVFDGLECRSTDKFVDSSGLSGTEEKLVDYMDQLTENANILSGAPNLETISTTDIIPNNPNSVSDSFGMDNGSLSSLKTNAGDLFSGINESIGSSVDKGQSAVKTSLDTITSSITSAINSATDAVDTAVSKVFSSVDQAGELANDRVVSFSNDLKEATSKVGATAIDVLRHGIVLVEDSLANGASFAAYSYGSAKELLPTEIRNVVNLSEEKVLEILRPAGAALQQFYVAVEGLERNLGLDPSDPIVPFVLFLGTSATLWVFYWRLTYGGYSGDISPQLTLELLKGKENVVLVDVRPEDLRERDGIPDLRRAARFRYASVTLPEFNSSVRKLLKSGRDLDDSLIAAVIRNLKIVQDRSKVIVLDADGSRSKGIARSLRKLGVKRPYLVQGGFQSWVKQGFRVKELKPETTLTILNEEAEAIIEDINPTPVKLLGYGVGLIAAVYASIEWEKTLQFIGIFGLGQTIYRRVAAYEGPEDFKQDVRLLLTPVRLGAQAYSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDTEETQDPFPDSAGAVTESVDLSEA* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1619 649 SMART rhod_4 365 490 IPR001763 -
Vvi5g1619 649 MobiDBLite consensus disorder prediction 614 649 - -
Vvi5g1619 649 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 347 493 IPR036873 -
Vvi5g1619 649 ProSiteProfiles Rhodanese domain profile. 375 493 IPR001763 -
Vvi5g1619 649 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 636 IPR044690 GO:0009704|GO:0071277|GO:0090333
Vvi5g1619 649 Gene3D - 359 495 IPR036873 -
Vvi5g1619 649 CDD RHOD 369 485 - -
Vvi5g1619 649 Pfam Rhodanese-like domain 371 486 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1619 357 454 Sulfurtransferasese or Rhodanese AT5G23060 34.694 1.59e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1619 - - vvi:100249037 1215.68