Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1585 ATGGATTCTGTGCCATCTTTGGAGATTTTAGTTCGAGCACCAGAAGGGTTCTCTCTATGGTGTGGACCTCCATTCAACAATGGTCAACCTGCTGTCAAGCTTGAAAAGGTTATTTGTACCAATGCAAAGTTCAGCGAAGATGGGTCCAGACTCATGGTGATGAAATCAGACTCCACTGTCAGCATATACGATTGCAGCAGCTCCAAAGAGATCAGATCATTTGCAGTTCCCAATATGTCTGCAGCCACCATGTCCCCTTGCGGGACCTATCTTCAGACCTTTCAAAGACCCTCAACACCACAGGAAAAGAATGTCATCTTATGGAAGACAGAAACCGGTGCTCCTGTTTATCAACACTTCCAGAAGAACATGACCAAAACCACATGGCCCTCAGTTCAATTTAGCTCTGATGAAGCTATTGCATGCCGTCTGGCAACAAATGAGATACAATTTTTTGATGCTCGGGATTTCTCTAAAGAAATTATATATCGAGTTAGAATTCCCGGAATAGCTGCTGTAGAGCTTTCTAAGGCACCTGGGTCCCATGTGGCTGCATTTATTCCAGAATCTAAGGGAATTCCTGCCAGTGTCCAGATATTTGCTTGTGGTGAAAATTCAATGAGTCAACCTGTTGCTCGACGAAGCTTTTTCCGATGTTCAACAGTGCAATTGAGTTGGAATCGTGGCTCTACGGGGCTTCTAGTTCTGGTTCAAGCTGATGTTGATAAAACCAACCAGAGTTATTTTGGAGAATCAAAGCTGAACTACTTGACAACAAATGGAACCCATGAAGGCCTTGTGCCACTCAGTAAAGAAGGGCCAGTTCATGATGTTCAGTGGTCATATTCTGGTTCAGAATTTGCTGTTGTTTATGGATTTATGCCTGCAAAAGCAACAGTGTTTGACAAGAAGTGCAATCCTCTGGTTGAGCTTGGCACAGGCCCTTACAATACTATTCGATGGAATCCAAAGGGGAAGTTCCTATGTTTGGCAGGTTTTGGAAACTTACCTGGTGATATGGCATTTTGGGACTACAAGGAGAAAAAGCAGCTTGGAACAACTAGGGCTGAGTGGTCTGTAACAAGTGAATGGTCCCCAGATGGATGCTATTTCATGACTGCCACAACAGCTCCAAGACTACAAGTTGACAATGGGATTAAAATTTTCCACCCCAATGGATCACTGTATTTCAAGACGATGTTTGATAAGTTGTACCAGGCTGATTGGAAACCGGAATCACCAGATAGGTTTGGTGAAATTGCTGAACTTGCCCAGTCCATTGACTCATTAAAAGTTGGAGAAACCAAACAACAAGGGCAAGGTTCAAAATCTTCCGTGGCTCCTAACAAAGCCACTTCTGCCAACCCTCCTACTCAAAAACCTGCTGCATATCGTCCACCACATGCAAAGACTGCAGCTGCCATTCAGACCAAGCTATTTGGAGGGAGCTCTACAGAAGAAATGAGCAAGAACGCTGCGAAAAACAAGAAAAAAAGGGAGAAACAGAGGGAGAAGAAGGCTGCTGAGGCCGCCACTGCTGCCAATAACGGTGCATGA 1557 0.4444 MDSVPSLEILVRAPEGFSLWCGPPFNNGQPAVKLEKVICTNAKFSEDGSRLMVMKSDSTVSIYDCSSSKEIRSFAVPNMSAATMSPCGTYLQTFQRPSTPQEKNVILWKTETGAPVYQHFQKNMTKTTWPSVQFSSDEAIACRLATNEIQFFDARDFSKEIIYRVRIPGIAAVELSKAPGSHVAAFIPESKGIPASVQIFACGENSMSQPVARRSFFRCSTVQLSWNRGSTGLLVLVQADVDKTNQSYFGESKLNYLTTNGTHEGLVPLSKEGPVHDVQWSYSGSEFAVVYGFMPAKATVFDKKCNPLVELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGTTRAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHPNGSLYFKTMFDKLYQADWKPESPDRFGEIAELAQSIDSLKVGETKQQGQGSKSSVAPNKATSANPPTQKPAAYRPPHAKTAAAIQTKLFGGSSTEEMSKNAAKNKKKREKQREKKAAEAATAANNGA* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1585 518 MobiDBLite consensus disorder prediction 432 518 - -
Vvi5g1585 518 PIRSF Transl_init_eIF2A 1 518 IPR011387 GO:0003743|GO:0006413
Vvi5g1585 518 MobiDBLite consensus disorder prediction 432 459 - -
Vvi5g1585 518 Pfam Eukaryotic translation initiation factor eIF2A 214 407 IPR013979 -
Vvi5g1585 518 FunFam Eukaryotic translation initiation factor 2A 196 419 - -
Vvi5g1585 518 SUPERFAMILY DPP6 N-terminal domain-like 39 405 - -
Vvi5g1585 518 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 7 510 IPR011387 GO:0003743|GO:0006413
Vvi5g1585 518 FunFam Eukaryotic translation initiation factor 2A 2 153 - -
Vvi5g1585 518 Gene3D - 196 446 IPR015943 GO:0005515
Vvi5g1585 518 Gene3D - 25 188 IPR015943 GO:0005515
Vvi5g1585 518 Coils Coil 490 514 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1585 84 414 Eukaryotic Initiation Factors Gene Family AT5G27640 22.778 1.06e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1585 K15026 - vvi:100249064 1002.66