Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1549 ATGGTAACTACAGAATCTGGTTTGCAGTATAAGGATATAAAAGTTGGTGAAGGCCCTAGTCCACCAATTGGTTTTCAGGTGGCTGCAAACTATGTTGCCATGGTTCCGTCTGGACAAATTTTTGACAGTTCCTTGGAGAAAGGTCAGCTTTATATTTTTCGGGTTGGCTCTGGTCAGGTGATCAAAGGACTTGATGAAGGGATACTAACAATGAAAACTGGAGGGAAACGCCGAATCTACATTCCAGGACCATTGGCATTCCCGAAAGGTCTTACCTCAGCTCCAGGCAGGCCAAGGGTTGCTGCAAACAGTCCAGTTGTTTTCGACGTAAGTTTGGAATACATACCAGGCCTGGAAATAGATGAAGAGTAA 372 0.4462 MVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGILTMKTGGKRRIYIPGPLAFPKGLTSAPGRPRVAANSPVVFDVSLEYIPGLEIDEE* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1549 123 SUPERFAMILY FKBP-like 2 113 - -
Vvi5g1549 123 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 2 116 - -
Vvi5g1549 123 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 23 112 IPR001179 GO:0003755
Vvi5g1549 123 Gene3D - 1 114 IPR046357 GO:0003755
Vvi5g1549 123 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 24 116 IPR001179 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1549 5 112 Calmodulin-binding Proteins AT3G25230 40.367 4.64e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1549 K01802 - vvi:100259438 246.899