Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g1454 | ATGCAAATTCCAACAGATAATGAAACTGGAAGAATGGAAACTTCTGCTGGAGGGGAGTTAATTTCATTTGAAGGTGATACAGTTCAAGAACCATATGAGGGCATGCTATTTGAATCAGAAGGAGCTGCCAAAGCATTCTATGATGAATATGCCAGAAGGGTGGGATTTGTGACTAGAGTTTTATCATCCCGTAAATCAGAGCGTGATGGGTCAATTATCTCTCGTGGACTGGGATGTAGAGGGGGTTCTGACAATAAAAAAGCAAGGCACCTTCAAACACAGAAGCGAGACAGACGACGAGAAGGCTGCACAGCTATGATTTTGGTGAAGAGAGAGAAGCCTGGGCAGTGGATAGTTAGGAAATTTGTGAGGGACCATAATCATCCTCTGGTGGTTCAGTTGCAAAAGAGTCGTCCAACTCTAGATGAGAAGGATAAGAAAATCCAGGAACTTACTGCTGAACTGCGGGTTAAGAAACGGTTAACATCAGCATACAGAGAACAGCTTCTAATGTTTGTTAAAGACGTCGAAAACCATAATGAACATTTATCAAAGAAAGTTGAGGTTGTTGTTGACAATTTGAAAGACCTTGAAGCTAAAAGGCAGGAGCTTTTACAGCATAGATAG | 627 | 0.4163 | MQIPTDNETGRMETSAGGELISFEGDTVQEPYEGMLFESEGAAKAFYDEYARRVGFVTRVLSSRKSERDGSIISRGLGCRGGSDNKKARHLQTQKRDRRREGCTAMILVKREKPGQWIVRKFVRDHNHPLVVQLQKSRPTLDEKDKKIQELTAELRVKKRLTSAYREQLLMFVKDVENHNEHLSKKVEVVVDNLKDLEAKRQELLQHR* | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g1454 | 208 | Coils | Coil | 141 | 161 | - | - | |
Vvi5g1454 | 208 | MobiDBLite | consensus disorder prediction | 77 | 97 | - | - | |
Vvi5g1454 | 208 | Pfam | FAR1 DNA-binding domain | 46 | 131 | IPR004330 | - | |
Vvi5g1454 | 208 | Coils | Coil | 180 | 207 | - | - | |
Vvi5g1454 | 208 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 23 | 200 | - | - | |
Vvi5g1454 | 208 | MobiDBLite | consensus disorder prediction | 82 | 97 | - | - | |
Vvi5g1454 | 208 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi5g1454 | Vvi-Chr5 | 22417000 | 22418682 | Dispersed/Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Vvi5g1454 | FAR1 | 3.9e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g1454 | - | - | vvi:100249265 | 414.461 |