Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1365 ATGGACAATGCCTTAGTACCAACTGGATGGAATGGACAATACCAATCAGGAGAAGCATTTAATGCATCATCTTGCAACAGATATTATTTGAGTGGCTATGAAGCTGAAGAAGATCCGATAACGTCTGTGTCATTCAAATCCCCTAGGGACAGTTCTGGTCATGGCAGCCACACAGCCCCAACAGCTGCAGGCCGGTATGTGACAAACAGGAATTATAAGGGCTTGGCAGCTGGAGGTGCTAGAGAAGGTGCTCCAATGGCAAGGATTGCAGTGTACAAGACTTGTTGGGACTCAGGTTGCTATGATGTGGGCTTACTAGCTGCCTTTGATGATGCAATTAGAGATGGCATTTATATCTTGTCTGTCCTTAGGTTATGA 378 0.455 MDNALVPTGWNGQYQSGEAFNASSCNRYYLSGYEAEEDPITSVSFKSPRDSSGHGSHTAPTAAGRYVTNRNYKGLAAGGAREGAPMARIAVYKTCWDSGCYDVGLLAAFDDAIRDGIYILSVLRL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1365 125 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 122 IPR045051 -
Vvi5g1365 125 Pfam Subtilase family 46 121 IPR000209 GO:0006508|GO:0008236
Vvi5g1365 125 MobiDBLite consensus disorder prediction 44 65 - -
Vvi5g1365 125 SUPERFAMILY Subtilisin-like 36 121 IPR036852 GO:0004252|GO:0006508
Vvi5g1365 125 MobiDBLite consensus disorder prediction 38 65 - -
Vvi5g1365 125 Gene3D Peptidase S8/S53 domain 6 122 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1365 Vvi-Chr5 21216010 21216498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1365 6 122 Subtilisin-like Serine Gene Family AT5G45640 47.692 1.25e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1365 - - vvi:100246533 211.46