Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1319 ATGAAGAAGGCCATTGGTCAAACTGTTAGGGACCTTAAGAGAGAGGTGAATAAGAAAGTTCTTAAAGTTCCAGGAATAGAACAGAAGGTTCTGGATGCTACTAGCAATGAGCCTTGGGGTCCTCATGGAACACATCTTGCAGATATTGCACAGGCTACCAGAAACTATCACGAGTACCAAATGATCATGTCAGTAATCTGGAAGCGGATTAATGATACAGGAAAGAATTGGCGGCATGTCTACAAGGCTTTGACAGTTCTGGAATACTTGGTAGGCCATGGTTCTGAGCGTGTCATAGATGAGATTCGGGAGCATATATACCAAATATCAACTTTGTCAGACTTTCAATATATTGATTCAAGTGGGAGGGATCAGGGAAGCAATGTCAGAAAGAAATCTCAAAGTCTCGTGGCTCTGGTGAATGATAAAGAAAGGATACAGGAAGTTAGACAGAAGGCTGCTGCCAACAGGGACAAGTTTCGCAACACAAACTCAGCAGGCGGTATGTATAGGCCCAGTTCATATTCTAGTTCAGGAGGATATGGTGACCGTTATGATGATGATCGATATGAAGGCCGCTATGGGAGAGACGAAGATCGAAATGGTTATGGGAGAGAAAGAGAATGGGGCAGCAGAGATGATGACCGGTATGGTAGAAATGGGGACTCATATGGTCCTGAAGGGGATCGCTATGGCAGAGATTCTGATGAACGGTATGGTAGAGATGGCTATAAGGATGATGATTACAGGGGAAGAAGTCGAAGCAATGAGGACTACCAGTATGGCTCTAGAAGTAGGAGTGCTGATAGAGATAGGGACCGTGCTTTTGATGAGGAGAGCAACCATTCATCTAGAGGTGGTGCCCGAACTGATGAGCATCCTCAGTATGGAAGGCAGCTTGAACGAAAATTTTCTGAACAAAATCTTGATGCTCCTCCTAGTTATGAAGAAGCTGTAGCTGATGCCCACAGTCCTGTTCATGATGAGAGGGATGGAGCAACCCCAGCAGCACCTGCCCCTAAAACATCTTCTCCACCTGTAAGCACTAGTCCTAGCCAAGCAACAACTGCTGTTGGTCCTTCTACATCTCCTCCTGCCAACAAGGAAGTTGATGCTTTTGATGAATTTGATCCGCGCGGTCCAGTCTCAGCTGTCCCAGCTACATCAATTAGTCCGGAAATGGACTTACTTGGCTCTCTGTCAGAGTCATTTTCTTCAAATTCATTGGCTCTTGTGCCATCTGGACCTGCAACCACAACATCTGAGGCTGCTGTCCTTGGAAATGCTGGGTCTGCACCCGCATCAGCAGCAATGCCATCTGGATCTGCTGTTATGAGCCAGTCTTTTGAAGACCCATTTGGTGACTCCCCTTTTAGAGCTTTGCCTTCAGCAGAGAGTGTACCAGCTGAACCTCAGGATTCAGCTTCCACAACTTCCTTCCAGACCATGAATCAAACATCAGGACCACCCTTCCCAGTTACCCAAGGAGTGGACACGGGTTCCAACTTTGACTTTGGGGACACTTTCCCTGGCATAACTTACACGCCATCCGGTGTCTCCACTGCACAACCTCCTTCTGCAAGCCCACAATTTTCACCCCAAGAGCAATGGATTCCCCAGCAGAACAATGATATCCTAGCAGACATTCTACCACCTTCAGGATCTTCAGCTCCTGCCATTTCACAGGCTGCTTTCCCAGCTCCAACTGGCCAGTCTGTGCAGCCAAACCCTAATGTTGTTGGGGGCTTTCTTGCACAGTCAGGATCTGCAGATCATGCAGCTTCACAATTTTCTCCTCAGATTCCAACTGGACCAGCTGCACAATATAACAATGGGAACTTCCTTTCACAGTTGGGTTCTGCAGCGCCTGTACCTTCACAGTCTCCTTTTCAAGCTCCTGTACCTTCTCAGTCTCCTTTTCAAGCTCCTGTACCTTCTCAGTCTCCTTTTCAAGCTCCAGTATCTTCACAGTCTCCTTTTCAAGCTCCGGTATCTTCACAGTCTCCTTTTCAAGCCCCAGTGCCTTCACAGTCTCCTTTTCAAGCTCCAGGACCTTCACAGTCTCCTTTTCAAGCTCCAGTACCTTCACAGGCTCCTTTTCAAGCTCCAGGACCTTCACAGGCTCCTTTTCAATCACCAAGTGGGCCAGTTACACATCCTAGCAATGATAACCTTGGTGGCTTATTTCCACAAGCTGGACCGCCTGGTTCAGTGATGTCACAGTCTACTCCCCCTGCTTCAACAGGTTCACTTGCTATAGTTCCTCAAGCATCCAAGGACAAGTTTGAAACGAAGTCAACGGTTTGGGCTGATACACTGAGCAGAGGATTAGTCAATTTGAATATATCTGGAGCTAAAATTAATCCATTGGCGGATATTGGAATTGATTTTGATGCCATTAATCGGAAAGAAAAGAGGATGGAGAAACCTAAGCCTGCTACCACAGCTCCTGTATCTACTACTACAATGGGCAAGGCAATGGGATCTGGCTCTGGAATGGGTCGTGCTGGTGCAGGTGCACTCAGGCCTCCACCAAATACTATGATGGGTTCAGGTATGGGAATGGGCATGGGCATGGGTAGTGGCCCTGGTGCAGGCATGAGTATGGGTATGGGTGGTGGTCCTGGTTCAGGCATGGGTATGGGTATGGGTGGTGCCCCTGGAGTGGGCATGGGTATGGGTATGGGTGGTGCCCCTGCAGCAGCGGGTATGGGTATGGGTATGGGGATGGGAGGAGGCATGGGCATGGGAGGATATGGAGGCATGAATCAACCTATGGGCATGGGTATGAATGTGGGCATGGGCATGAATATGGGAATGGGGCAAGGAGCCCAGATGCAACAACCAACTGGATTGCCTCCTGGGGGTTATAACCCCATGATGGGCTCAGGTGGTTATGCTCCTCAGCAACCATATGGTGGTGGCTACCGATGA 2934 0.4847 MKKAIGQTVRDLKREVNKKVLKVPGIEQKVLDATSNEPWGPHGTHLADIAQATRNYHEYQMIMSVIWKRINDTGKNWRHVYKALTVLEYLVGHGSERVIDEIREHIYQISTLSDFQYIDSSGRDQGSNVRKKSQSLVALVNDKERIQEVRQKAAANRDKFRNTNSAGGMYRPSSYSSSGGYGDRYDDDRYEGRYGRDEDRNGYGREREWGSRDDDRYGRNGDSYGPEGDRYGRDSDERYGRDGYKDDDYRGRSRSNEDYQYGSRSRSADRDRDRAFDEESNHSSRGGARTDEHPQYGRQLERKFSEQNLDAPPSYEEAVADAHSPVHDERDGATPAAPAPKTSSPPVSTSPSQATTAVGPSTSPPANKEVDAFDEFDPRGPVSAVPATSISPEMDLLGSLSESFSSNSLALVPSGPATTTSEAAVLGNAGSAPASAAMPSGSAVMSQSFEDPFGDSPFRALPSAESVPAEPQDSASTTSFQTMNQTSGPPFPVTQGVDTGSNFDFGDTFPGITYTPSGVSTAQPPSASPQFSPQEQWIPQQNNDILADILPPSGSSAPAISQAAFPAPTGQSVQPNPNVVGGFLAQSGSADHAASQFSPQIPTGPAAQYNNGNFLSQLGSAAPVPSQSPFQAPVPSQSPFQAPVPSQSPFQAPVSSQSPFQAPVSSQSPFQAPVPSQSPFQAPGPSQSPFQAPVPSQAPFQAPGPSQAPFQSPSGPVTHPSNDNLGGLFPQAGPPGSVMSQSTPPASTGSLAIVPQASKDKFETKSTVWADTLSRGLVNLNISGAKINPLADIGIDFDAINRKEKRMEKPKPATTAPVSTTTMGKAMGSGSGMGRAGAGALRPPPNTMMGSGMGMGMGMGSGPGAGMSMGMGGGPGSGMGMGMGGAPGVGMGMGMGGAPAAAGMGMGMGMGGGMGMGGYGGMNQPMGMGMNVGMGMNMGMGQGAQMQQPTGLPPGGYNPMMGSGGYAPQQPYGGGYR* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1319 977 MobiDBLite consensus disorder prediction 806 835 - -
Vvi5g1319 977 ProSiteProfiles ENTH domain profile. 18 150 IPR013809 -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 628 642 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 735 750 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 158 180 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 429 495 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 591 750 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 703 725 - -
Vvi5g1319 977 FunFam Clathrin interactor 1 16 163 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 182 305 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 509 534 - -
Vvi5g1319 977 PANTHER EPSIN/ENT-RELATED 522 866 - -
Vvi5g1319 977 CDD ENTH 26 142 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 591 627 - -
Vvi5g1319 977 Pfam ENTH domain 26 146 IPR013809 -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 346 363 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 469 495 - -
Vvi5g1319 977 Gene3D - 23 164 IPR008942 -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 643 675 - -
Vvi5g1319 977 SUPERFAMILY ENTH/VHS domain 7 150 IPR008942 -
Vvi5g1319 977 SMART enth_2 24 150 IPR013809 -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 676 702 - -
Vvi5g1319 977 MobiDBLite consensus disorder prediction 150 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1319 Vvi-Chr5 20411863 20423964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1319 600 707 Trihelix Transcription Factor Family AT1G49490 38.017 5.86e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1319 K12471 - vvi:100267012 1515.75