Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1221 ATGTTGAGTCTAGACTACGAATCTAAGTGGGGACACATTCGACTTGATTACTCAGGTCGGACTGCGTATATCAAAATTCTACCTGTAGGGGTTCATATGGGTAGACTTGAATCTGTAGTGAATCTTCGCTCTACATCTGCCAAAATCAAAGAAATTCAAAAACAATTTGAAGGAATAAAAATTGATTCTATGGATGACATGGATATATTTAAAGGTATTAGTCTAAAATTTCTTGTTGTAGAACAGCTCTTACATATATTGATGGCCAAGGAAAAATGCATCGGGTCAGCTATTCTGAATCTCACGCACAACAAGTAG 318 0.3648 MLSLDYESKWGHIRLDYSGRTAYIKILPVGVHMGRLESVVNLRSTSAKIKEIQKQFEGIKIDSMDDMDIFKGISLKFLVVEQLLHILMAKEKCIGSAILNLTHNK* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1221 105 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 85 IPR001830 GO:0003824|GO:0005992
Vvi5g1221 105 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 84 - -
Vvi5g1221 105 Gene3D Glycogen Phosphorylase B; 13 32 - -
Vvi5g1221 105 Pfam Glycosyltransferase family 20 1 85 IPR001830 GO:0003824|GO:0005992
Vvi5g1221 105 Gene3D Glycogen Phosphorylase B; 33 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1221 Vvi-Chr5 18541299 18541616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1221 1 84 Trehalose Biosynthesis Gene Families AT1G23870 71.765 1.30e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1221 K16055 - vvi:100246842 136.732