Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1130 ATGGAAGCTTTAACTTATCTTCACTTTGATCGATCTGCTATTAAGGAATTACCCTCCGCAATAAAATATCTCCTTGAAGACCTCCTACTCTTTGTTTGTTCAAATCCAGATGCTTTTCCAGAAATCATGGAGGATATGAAAGAATTTCTTGATTCAAGAACAGGTATAAAAGAGCTACCATCATCAATGGAACATCTTCTTAATATTAATTCATTGTTTTTGAGTGATTTCAAGAACTTGAGGAGTCTTCTAAGCAGCATTCGTAGGTTTAAATCTTTTCGCCGACTCTTTCTCAATGGGTGCTCAAGCCTACGGAACTTTCCCGAAATCATGGAGGGTATGAAATACTTAGAGGTGCTTGGTTTGGAAGGAACAGCTATAAAAGAACTGCCATCATCAATTCAAAATCTGAAAAGCCTCCAAATGTTGTATTTGAGCAATTGCAAGAACCTTGTGACTATTCCAGACAGCATTAATGATTTGAGATGTCTTAAACGATTGATACTCCCTGGTTGTTCAAACTTGGAGAAGTTTCCCAAGAATCTGGAAGGCTTATGCACCTTAGTAGAACTAGATTTGAGTCACTGCAATCTAATGGAAGGGTCGATACCCACTGATATCTGGGGTCTATATTCCTTGTGTACATTAAATCTAAGTGGAAACCATATGGTTAGCATACCATCTGGCATCACTCAACTTTGTAGACTTCGTCTCCTTGATATCAGTCACTGCAAGATGCTCCAAGAAATTCCAGAGCTTTCATCAAGTCTACCACAAATAGATGCCCACGGCTGCACGAAGCTGGAAATGTTATCAAGTCCATCATCTCTACTCTGTCCTTTCCTCAAATGGTTCAAACGGTTCAATCCAACAAGTAATGAGGTATGA 888 0.3896 MEALTYLHFDRSAIKELPSAIKYLLEDLLLFVCSNPDAFPEIMEDMKEFLDSRTGIKELPSSMEHLLNINSLFLSDFKNLRSLLSSIRRFKSFRRLFLNGCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLCTLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAHGCTKLEMLSSPSSLLCPFLKWFKRFNPTSNEV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1130 295 Gene3D Ribonuclease Inhibitor 159 287 IPR032675 -
Vvi5g1130 295 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 109 185 - -
Vvi5g1130 295 SUPERFAMILY RNI-like 3 275 - -
Vvi5g1130 295 ProSiteProfiles Leucine-rich repeat profile. 212 233 IPR001611 GO:0005515
Vvi5g1130 295 Gene3D Ribonuclease Inhibitor 1 158 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1130 Vvi-Chr5 16239475 16240362 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1130 84 213 WRKY Transcription Factor Family AT4G12020 40.769 4.11e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1130 - - vvi:104877444 583.178