Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1077 ATGAAACCGAGTAAACTAAAAATTATGGAGAAAGTGGAACACAAACAGATGACACCTGATGCTACATACAACTATGTGAAATCCATCAGGCCAAGGGTGGTCCTAGCCTCGGCTCAGTGGAAGGCTGTTCAAGACTATTATCTGCAGAAAGTGAAGAAAACTAAAAGTTCTGGCTGCATTAACAACAGAGTCAGAAAGTCTCCATTCTTCCCATCAAAACAATATGTTGTAGCCTTTGATGATGACTCCATTGACATAGTAACAGAGTCAGATCTTGATGGATATGAGTCATATGGCACAAGCTGTGACTCTATAATCATGGTAACACAATCAGAGCTTGATGGATACGACTCAAGCTTAGGAAATCCACATACATCAATTGAAGGAATAAAGTAA 396 0.3939 MKPSKLKIMEKVEHKQMTPDATYNYVKSIRPRVVLASAQWKAVQDYYLQKVKKTKSSGCINNRVRKSPFFPSKQYVVAFDDDSIDIVTESDLDGYESYGTSCDSIIMVTQSELDGYDSSLGNPHTSIEGIK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1077 131 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 12 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1077 Vvi-Chr5 14943058 14946221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1077 2 95 Protein tyrosine phosphatase (PTP) family AT2G35680 49.000 9.71e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1077 - - vvi:100247978 193.356