Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1075 ATGGAGGCCTTAAGCTGCCTCATTAACAAAGCGGTTAGGGGGGGCTTCCTTTCCGGCTGCAGACTAAGGGGAAGGGGTGGAAATGGGATTCAAGGATTTCGAAAGAGTGATCCTGAGAGATGGGAATTTGCTAATGAAGATTTTGTGAAAGATCAAAAGCATCTCCTTAAGAATATTCACCGCAGAAAACCTATTCACAGCCACAGTCACCCTCAAGGTCCTCCTGCAGATTCAGAAAGAGCAGCATTTGATGAAGAAATAGAGAGGCTCTCTCGTGAAAAAACTGAGCTTCAGTTGAAGGTTTACAAGGTCAAAGAGCAGCAGTCAGCAAAGCTTCAGTTGGAAGACTTAACCCAGAGGGTTAGTGGAATGGAGCAGAGGCAGGAAAAGTTGCTGACCTTCTTGGAAAAGGCAGTTCAGAACCCTACTTTTGTTAAGCATCTTGCTCAGAAAATTGAATCAATGGATTTTTCAGCATATAATAAGAAAAGGCGATTGCCTCAAGTCGATCACTTGCAGCCAGTTGCTGAAAATAGTCTGTTGGACAATTATAGCAGCTCTAGAACTGAGTGTGGGAGTATTTTCCATAAAGATTTCTCAAATAAGCTGAAACTGGAGTTATCACCAGCTGCTTCAGATATTAACTTGCTTTCACAAAGCACACAGAGTTCCAATGAAGATGCAGGAAGTCCACACATGAAAATATCTGAAGGAGACCCCAAAGAGATGCCCATGCGAACGGAAGGCCATTTATTTGCACCTGAAACATTAGAGCTTTCAGATACCGGAACATCTTTTACTTTTAAAAGGGACCCAACCTTGTCTCAGCAAATGGGAGTGAATGAAAGCCAAAGGCTGCTTTACTTGCAGGAAAGTTTGACCTCTACTGAAGAAGGCGATGGCCATATCTCCTGCCATTTAAATCTAACTTTGGCATCTTCTCCATTACAAGTTGACAAAAGTAGTTCAACTAGGATGCCCCAAATAGGTCAGGATATTGGCAAATCCTCAGCATCTAGGTCTATTGCCGATGCTAAAGAAGCTGATTTTAGAGCTATCCACAAGAGCAGAAATTTTGCTGATGATGACACTATTTTGTCTTCCTCACAAGGGGCCTCAGTTGCAAATGAAGCACCTCCAACTGCTCCGGTCCGGGTGAATGATGTGTTCTGGGAACAGTTCCTGACTGAAAGACCAGGCTCTTCAGACACTGAAGAGGCAAGTTCAAATTTTAGGTCAAACCCATATGATGAGCAAGAAGATAGAAGAGCAGGCCAAGGAATGTTGGGTAACTCAAAAAGCATGGAGCATCTCACTCTTTGA 1323 0.4331 MEALSCLINKAVRGGFLSGCRLRGRGGNGIQGFRKSDPERWEFANEDFVKDQKHLLKNIHRRKPIHSHSHPQGPPADSERAAFDEEIERLSREKTELQLKVYKVKEQQSAKLQLEDLTQRVSGMEQRQEKLLTFLEKAVQNPTFVKHLAQKIESMDFSAYNKKRRLPQVDHLQPVAENSLLDNYSSSRTECGSIFHKDFSNKLKLELSPAASDINLLSQSTQSSNEDAGSPHMKISEGDPKEMPMRTEGHLFAPETLELSDTGTSFTFKRDPTLSQQMGVNESQRLLYLQESLTSTEEGDGHISCHLNLTLASSPLQVDKSSSTRMPQIGQDIGKSSASRSIADAKEADFRAIHKSRNFADDDTILSSSQGASVANEAPPTAPVRVNDVFWEQFLTERPGSSDTEEASSNFRSNPYDEQEDRRAGQGMLGNSKSMEHLTL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1075 440 MobiDBLite consensus disorder prediction 318 341 - -
Vvi5g1075 440 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 32 217 IPR027725 -
Vvi5g1075 440 MobiDBLite consensus disorder prediction 61 81 - -
Vvi5g1075 440 MobiDBLite consensus disorder prediction 396 440 - -
Vvi5g1075 440 Coils Coil 80 127 - -
Vvi5g1075 440 MobiDBLite consensus disorder prediction 318 338 - -
Vvi5g1075 440 MobiDBLite consensus disorder prediction 219 244 - -
Vvi5g1075 440 MobiDBLite consensus disorder prediction 397 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1075 Vvi-Chr5 14893559 14903037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1075 32 440 HSF AT4G13980 54.106 1.51e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1075 K09419 - vvi:100267444 811.986