Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1064 ATGGCTCATTTGGACATTCTTTTTTTTTTTTTTTGTATGTTTGTTTTATGTTCCTTTTGGATATTATCACCACGACACACTCATCCCGTTCAACTCATCACCTTCCCAACCACACCACCTAACTCATTTTTGGCTCACTTCATTCCCCTTCCCATGCAAATGAATTTCCATCAAAAGCAGAAAGCTTCCTCTACAAACCACACCCAAGCCCACGCCGACGACGACGTGACACTATGGAGGCGAAGTAGAGAGATGAGAGACCAGCACCTAAGATCATCGCCAATGTTGGAGGGGGATCTACAGGGCGGCGCCATCACCAGATACTCCTTGTTGTGGCTGCTCTTGTGGACCACGACAATGGGGCGTTTCGATGCAGCTGCTAGCGGCGAGGCTCGGAGTGGCGACAGGGAGGCACTTGGCGGAGCTGTCAGGTTCAAGAAGTCCTCAATTATAACTCCATTGAGTCCACTATTGCCCTCATATTGTCTTTCATTATCAATCAATTTGTTACAGTTGTGTTTGCAAAAAGGGTTTTATGGTACGGAACAAGCCAATAATATTGGGCTTGTAAATGCGGGCCAGTATCTTCGAGAGAAGTATGGAGGGTTTTTTTTTTTTTTTTCAATTCTATATATATGGGGTATTGGGTTACTAGCAGCTGGTCAGAGTAGTACAATTATGGACACCGTGCATGGGCATCCTCCAATGCACCACCCAAATGGCCAAGTGTTTGTTTTTTTAAATTCTTCATCACTTAATGTTAAATATTTAATTTTCATAAAAATTCCAAATAATTTTCTAAAATTCTAA 810 0.4259 MAHLDILFFFFCMFVLCSFWILSPRHTHPVQLITFPTTPPNSFLAHFIPLPMQMNFHQKQKASSTNHTQAHADDDVTLWRRSREMRDQHLRSSPMLEGDLQGGAITRYSLLWLLLWTTTMGRFDAAASGEARSGDREALGGAVRFKKSSIITPLSPLLPSYCLSLSINLLQLCLQKGFYGTEQANNIGLVNAGQYLREKYGGFFFFFSILYIWGIGLLAAGQSSTIMDTVHGHPPMHHPNGQVFVFLNSSSLNVKYLIFIKIPNNFLKF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1064 269 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 163 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1064 Vvi-Chr5 14591199 14603052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1064 163 233 Inorganic Solute Cotransporters AT1G47240 66.667 1.09e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1064 K21398 - vvi:100268041 93.9745