Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1046 ATGGGAAAGTATATGAGAAAAGCCAAGGCAAGAGGTGAGGTTGCGGTTATGGAGGTTTCGCAACCATGTCTAGGGGTTCGCACCCGGGCAAAGACCCTAGCTTTGGAGCGCCTTCAAAAATCGAGGCCACGGCCGTCTCCTCCACAATCGCCGCCGCAACAGCAGGCAAGCTCTAGCTCCTATCTCCAGCTGCGGAGCCGGCGACTTCTGAAGCCACCGATACTCGTCAGCAATTCAAAGAAACACAAACAGAACTTGAAAGAAGTTGATGTGGAAAACCCTAACCCTAAAGTGAAGGCCAGAGCGAGTTCGAGGTTGAGAGTAGGTTCGGTCAGGTGTGGGTCTGTTGGGTCGGTGTCGCTTGGGTGTTTGAGCGGCGAGGATGGTGTTCAGTCGCCGGCGGTGGATTTGTTGAAGTTGGGCAAAGAAGAACAGATTTTAGAGGACAACAACGCGAACGACTTGGGTATAGAGGCTTCATTTGGAGAAAACGTTTTGGATTTTGAAGCGAGAGATAGGAGCACTAGGGAAACCACACCTTGCAGTTTGATAAGAGATCCAGAAACCATAAGAACCCCTGGTTCTACTACTAAGCCTGCCAGCTCGTCTGGCATTAACAGGAGGATGGATAACTCGAGGCAAGGACATGTCCCAACAACACAAGAAATGGACCAATTTTTTCAAAGTGCAGAAGAAGAGCAGCAAAGAGTATTTACTGATAAGTATAACTTTGACCCCGTGAATGATAAGCCGCTCTCTGGACGATTTGAATGGGTGAAATTGAATCGTTAG 792 0.4899 MGKYMRKAKARGEVAVMEVSQPCLGVRTRAKTLALERLQKSRPRPSPPQSPPQQQASSSSYLQLRSRRLLKPPILVSNSKKHKQNLKEVDVENPNPKVKARASSRLRVGSVRCGSVGSVSLGCLSGEDGVQSPAVDLLKLGKEEQILEDNNANDLGIEASFGENVLDFEARDRSTRETTPCSLIRDPETIRTPGSTTKPASSSGINRRMDNSRQGHVPTTQEMDQFFQSAEEEQQRVFTDKYNFDPVNDKPLSGRFEWVKLNR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1046 263 MobiDBLite consensus disorder prediction 189 216 - -
Vvi5g1046 263 PIRSF CKI_KRP_plant 1 263 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vvi5g1046 263 MobiDBLite consensus disorder prediction 35 103 - -
Vvi5g1046 263 MobiDBLite consensus disorder prediction 81 95 - -
Vvi5g1046 263 Gene3D p27 206 263 IPR044898 -
Vvi5g1046 263 Pfam Cyclin-dependent kinase inhibitor 217 261 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vvi5g1046 263 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 262 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vvi5g1046 263 MobiDBLite consensus disorder prediction 185 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1046 Vvi-Chr5 14028764 14031050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1046 1 261 Core Cell Cycle Gene Families AT5G48820 39.024 2.39e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1046 - - vvi:100245147 445.662