Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1045 ATGGGAGTGGCTTCAGAGGGTAATGATGACTATGGAACTCCACCCTTCAATGTAGAACAGCTTGTGAGTCTTCATGGGAAGACTACGTTGACTGCTGCTATTACAAGGGTGCTGGCAGAGGAAGGAAAAGCAAAGGTAGTTGCCCTCGATGAAATTGACAAGGCTCCTAAAGAGAAGAAGAGAGGAATTACAATTGCAACGACCCATGTCGAGTATGAGACTGCTAAGCGGCACTGTGACCATGTGGACTGTCCAGGACATGCGGATTATGTGAAGAATATGATTACTGGAGCTGCCCAAATGGATGGTAGTATTCAGGTTGTTTTGCTCCTAATGGACCCATGCCACGGACAAAGGAACACATTCTTCTTGCGTGCCAGAAATGGAATTCCGTGA 396 0.4672 MGVASEGNDDYGTPPFNVEQLVSLHGKTTLTAAITRVLAEEGKAKVVALDEIDKAPKEKKRGITIATTHVEYETAKRHCDHVDCPGHADYVKNMITGAAQMDGSIQVVLLLMDPCHGQRNTFFLRARNGIP* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1045 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 119 IPR027417 -
Vvi5g1045 131 PANTHER ELONGATION FACTOR TU-RELATED 25 108 - -
Vvi5g1045 131 PRINTS GTP-binding elongation factor signature 60 68 IPR000795 GO:0003924|GO:0005525
Vvi5g1045 131 PRINTS GTP-binding elongation factor signature 96 107 IPR000795 GO:0003924|GO:0005525
Vvi5g1045 131 PRINTS GTP-binding elongation factor signature 80 90 IPR000795 GO:0003924|GO:0005525
Vvi5g1045 131 Pfam Elongation factor Tu GTP binding domain 25 121 IPR000795 GO:0003924|GO:0005525
Vvi5g1045 131 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 IPR031157 -
Vvi5g1045 131 FunFam Uncharacterized protein 23 131 - -
Vvi5g1045 131 Gene3D - 23 131 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1045 Vvi-Chr5 13960495 13960890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1045 52 108 Eukaryotic Initiation Factors Gene Family AT1G07930 43.860 1.78e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1045 K02358 - pop:7481461 155.992