Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1039 ATGGACATGGATCCTAACTACAAGAAGCTTTCAATGAGCACTCACATGAAAAGCATCAGTGGAACTCCTCATTTTCCTGCTCTACAATTTGAGAGGTTCAACAAAAATAATCTCTTCAAGTTAAGAGGGGAGAAAATTGATGATAGTTCAATCTCAATGACCTTGCACTTAGCAGATCCATGTCGAGCAAAGAGTATCCATTTTGCATTTTATCTTGATTCTGATACTGCACTTTCAATAGCTGGTGAGATGGTTGAACAACTGGATTTCTCTAATGAAGATGTGGCAGTCATAGCTGAGTTAATTGATGTTATGACATCTGAACTTGTACCCACATGGAAACCTGCATTTAAGAGCATGTTATGTGGAGCAAATAGTTCATGTGAGGATTCTCTTGTACTTCACAATGGTGGAACCTCATTGAGGCATCCTTGTGATTCAGGTTCAGCTAAGGGTACATCAGACACAGTTACTGAACAACATCCTATCTCACTGTTGGCTAATGGGGAAGAACAGAGCACTGTGGAGTCTGCTCTTTCAGGAATGTCCACTAAAGATGATGCCACAGTTGCTTCAGATGCAAATGACATCAAATCTTTAGAATGCCCTGATGATGAATGCTATGAAGCTTCGGACAGATGTTGTTTCAATAGAGATCGTCAGGTACTTGATCCTTATTCTTTTCCTTCGGACATTGTGAAGGAAGCATGTCGGGGTCCAACGATTGAGGATGCTAGTGGGCAAACTCGTGGAAGGGAGACTGAGCCTACTGCACGGGATAGGGGTAGGAAGGATAAGTCTTGTGATACCGTTGCCAATATGGAGGCAAGGTTAGCCAAGGTGGAGCTAGCCATGGCAAACACTCAGGAGGGGTTGGACTTGATTGAGCAAGGCATGGAGAAAGGTATGAAGGATCTTAGGGAACAAATCTAA 933 0.4277 MDMDPNYKKLSMSTHMKSISGTPHFPALQFERFNKNNLFKLRGEKIDDSSISMTLHLADPCRAKSIHFAFYLDSDTALSIAGEMVEQLDFSNEDVAVIAELIDVMTSELVPTWKPAFKSMLCGANSSCEDSLVLHNGGTSLRHPCDSGSAKGTSDTVTEQHPISLLANGEEQSTVESALSGMSTKDDATVASDANDIKSLECPDDECYEASDRCCFNRDRQVLDPYSFPSDIVKEACRGPTIEDASGQTRGRETEPTARDRGRKDKSCDTVANMEARLAKVELAMANTQEGLDLIEQGMEKGMKDLREQI* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1039 310 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 34 243 - -
Vvi5g1039 310 Coils Coil 271 291 - -
Vvi5g1039 310 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 65 104 IPR024678 GO:0004674|GO:0005524
Vvi5g1039 310 MobiDBLite consensus disorder prediction 241 268 - -
Vvi5g1039 310 MobiDBLite consensus disorder prediction 248 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1039 Vvi-Chr5 13705919 13708039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1039 17 110 MAP Kinase Kinase Kinase AT5G41990 43.878 1.74e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1039 K08867 - vvi:100246117 412.92