LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi5g1025	ATGAGGCTCAGGAATGGGGATTTGGGCATTGGGTCAAGACAGGACGTTGTTGATTGGATTGCAAAGGTTCACGCCCATTTCGGTTTTGGACCCCTGTGTACATACTTGGCTATAAACTACCTAGATTGGTTCCTTTCTGTATATGAATTTCTAAAGGTAAAGCTTGGATGGCACAATTGTTGGTTGTGGCTTGCTTATCTCTTGCAGCCAAAATGGAAGGAGATTGCTGCTCCTCGCATTTGTTACTTAGTTGCTGAAGGAAGTTTTGAATCATATTCAAACAGTGCAAGACTATGTCTTAAAATTTTTGAACGCTATCCTTGA	324	0.4136	MRLRNGDLGIGSRQDVVDWIAKVHAHFGFGPLCTYLAINYLDWFLSVYEFLKVKLGWHNCWLWLAYLLQPKWKEIAAPRICYLVAEGSFESYSNSARLCLKIFERYP*	108

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi5g1025	107	Pfam	Cyclin, N-terminal domain	12	54	IPR006671	-
	Vvi5g1025	107	SUPERFAMILY	Cyclin-like	6	85	IPR036915	-
	Vvi5g1025	107	Gene3D	-	3	104	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi5g1025	Vvi-Chr5	13495022	13495345	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi5g1025	2	86	Core Cell Cycle Gene Families	AT2G22490	44.186	2.30e-13	62.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi5g1025	K18810		-	vvi:100247298	95.5153

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