Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1025 ATGAGGCTCAGGAATGGGGATTTGGGCATTGGGTCAAGACAGGACGTTGTTGATTGGATTGCAAAGGTTCACGCCCATTTCGGTTTTGGACCCCTGTGTACATACTTGGCTATAAACTACCTAGATTGGTTCCTTTCTGTATATGAATTTCTAAAGGTAAAGCTTGGATGGCACAATTGTTGGTTGTGGCTTGCTTATCTCTTGCAGCCAAAATGGAAGGAGATTGCTGCTCCTCGCATTTGTTACTTAGTTGCTGAAGGAAGTTTTGAATCATATTCAAACAGTGCAAGACTATGTCTTAAAATTTTTGAACGCTATCCTTGA 324 0.4136 MRLRNGDLGIGSRQDVVDWIAKVHAHFGFGPLCTYLAINYLDWFLSVYEFLKVKLGWHNCWLWLAYLLQPKWKEIAAPRICYLVAEGSFESYSNSARLCLKIFERYP* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1025 107 Pfam Cyclin, N-terminal domain 12 54 IPR006671 -
Vvi5g1025 107 SUPERFAMILY Cyclin-like 6 85 IPR036915 -
Vvi5g1025 107 Gene3D - 3 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g1025 Vvi-Chr5 13495022 13495345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g1025 2 86 Core Cell Cycle Gene Families AT2G22490 44.186 2.30e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1025 K18810 - vvi:100247298 95.5153