Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0996 ATGGCGACTACGTTCCCAAAAAACCTATTTATAATAGCAAAAGAACGAGGTATAATAGTGTGGGTGGCACCTCACCCTAACCAGGACGCGTCAAGCTCACAATCCACTTCTGGGCTTCTGGCAATCTTAGATTTGAATCAGATTATGGAGGACATGGACATTGATCAAGTAATGGATGTTCCAGACACCCCCGATAGATCAGCTGAGCGGAACATAGATGGTAGAAAATGTGATAAACATGACAGTAGTTCATTAGCATCTGCTCATTCAGGAAATTCTAAGGATAAAGGAGTTCTGAATCAGCTGAGGGGCAGGGGTAGACTGGTCACTGAAAACGGGCACAGCAGAAGACTCCATTTTCGTTCTCGGGAAAGCTCTGCCAATTCTGGTGAAACTGAGTGCTGCAGTAAATCCATGGTTTCCCAATTGGAGAATTCTTCTGCTCCCAAAAGTGCTCATTTGTTTAGGAGAATGAGATCAGACGGGATCTCGAAGCATGAAGCAAAACATTCTATTGGACCTCAACATACAAATAAAGGGAAAGCTTTCTGCAATGGATTTCCTTCCAAATCATCTGCATGCCAAAATGATAACAAATTTTTGGATTTAATTGGACCAAATGGTGCTTTCAAAGATCTTCTGGATGAAGAAATAGGAAAAGGATCAATGGCAACCAATGGTTGTTCTTCCTTGCATTGCATTGAAAATTCTCCAAAGCCATCCTGCAATACCTGGAAAGGGAAAGAAAAAACAGACAATGGTGCATGTGATGGTTCTGGTTCAGGTATAGGTTTTCGTGAAGCTTTTGATATCTCTATTGATATTCAACCTAGAAGTGAAAAGCATGTCTCCTCATCTCTTCAATATATTACCTCACCTAGAGTGTCTGGGCAAAAAAGGTTGGTACGGAATGGATGTATTTCTCCACATAATATTATTGCAAGGGCTAAACAATTAGCTGAACAGCAAAGTAGCAGCTCCAAAGATGTTGAACAGAATGATGCTAAGGATATTTTATCTAGAGCTTCACCATCTCGGATGGATATTAAAGATCCAATTGCTGAAATCAATAATTCTAGTAGGGTCAAAGGAAAAAGCATAATAAGTCATCCTTGTACATCAAAGCAGCATGACTTCGGAACTGTAACTAGGAGTCCAATAGTTCATAATGAACAAGCTAATGACAACAGTGACACTGGCAGAGATGCATTTGGGTGCTTTGAAGGACTGAGTGGTTGGAGAAGTACACGTAATCGATCAAAGAAAGTAGATGTCTCTTGTCCGATGGGGGTGGGCATCTTCCCAGGAGAAATAATGCTGTTCAATGTTCTTTGGACCAGAAAAATGATAATGGAGTGGAGAAAAAAGATGATCCTGAAGTTCAGGCTATGTCTTTACAGCATGGGCCTGCTCCATCTGGAGCTCAAACAACTTCCAATCTTATGTCAGGGTCAAACCAAGTAA 1464 0.4098 MATTFPKNLFIIAKERGIIVWVAPHPNQDASSSQSTSGLLAILDLNQIMEDMDIDQVMDVPDTPDRSAERNIDGRKCDKHDSSSLASAHSGNSKDKGVLNQLRGRGRLVTENGHSRRLHFRSRESSANSGETECCSKSMVSQLENSSAPKSAHLFRRMRSDGISKHEAKHSIGPQHTNKGKAFCNGFPSKSSACQNDNKFLDLIGPNGAFKDLLDEEIGKGSMATNGCSSLHCIENSPKPSCNTWKGKEKTDNGACDGSGSGIGFREAFDISIDIQPRSEKHVSSSLQYITSPRVSGQKRLVRNGCISPHNIIARAKQLAEQQSSSSKDVEQNDAKDILSRASPSRMDIKDPIAEINNSSRVKGKSIISHPCTSKQHDFGTVTRSPIVHNEQANDNSDTGRDAFGCFEGLSGWRSTRNRSKKVDVSCPMGVGIFPGEIMLFNVLWTRKMIMEWRKKMILKFRLCLYSMGLLHLELKQLPILCQGQTK* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0996 487 MobiDBLite consensus disorder prediction 330 344 - -
Vvi5g0996 487 MobiDBLite consensus disorder prediction 58 132 - -
Vvi5g0996 487 MobiDBLite consensus disorder prediction 317 344 - -
Vvi5g0996 487 MobiDBLite consensus disorder prediction 59 83 - -
Vvi5g0996 487 MobiDBLite consensus disorder prediction 109 126 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0996 49 420 C3H Transcription Factor Family AT1G04790 27.105 2.66e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0996 - - vri:117914107 745.732