Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0976 ATGAAAAGATTGACCAGCTTTCTTCTAATGTTTTGCTTTTCCCTATGCATTATTCTCATGTCATTCAGGCAATCTCAGTTCTTCAATGGCACCATCTACGATGTTCGAGTTGTCAACGGCTTCACGGACAATTCATCGTTGGTATTGGTAATTTGGTGTTCCTCCCAACATAATGATTTAGGCGGACGTGCCCTCCAGGCGGGTGATGATTTTAGTTGGAGTCTGAAAACCAACTTGTGGGCCACCACCCTTTTCCACTGCACCATGAAATGGGATCAACGGAGGACAAGTTTTGAAGCCTTTCAGGTTCAGCGGGATAGTCAGCGATGTGCCCCTTTCAGGACCTGCTTTTGGCTGGTGAAAGAGGACGGATTTTATTTCAGCAATGACCAAGTAAACTGGAAGAAGGATTTTTCATGGTCATAG 426 0.4484 MKRLTSFLLMFCFSLCIILMSFRQSQFFNGTIYDVRVVNGFTDNSSLVLVIWCSSQHNDLGGRALQAGDDFSWSLKTNLWATTLFHCTMKWDQRRTSFEAFQVQRDSQRCAPFRTCFWLVKEDGFYFSNDQVNWKKDFSWS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0976 141 PANTHER - 33 134 IPR010264 -
Vvi5g0976 141 Pfam Plant self-incompatibility protein S1 35 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0976 Vvi-Chr5 11227881 11228306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0976 47 124 Carbohydrate Esterase AT3G16970 31.250 1.07e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0976 - - vvi:104879334 260.766