Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0956 ATGCATAAACTTAGATTGCTCAAAATCCATAACCTGCGTAGAAAGTTGTTTCTTGAAAACCACCTTCCAAGGGACTTTGAATTCCCTTCTTATGAGCTAAGATATCTGCATTGGGATGGATACCCTTTAGAATCTTTGCCAGTTAATTTTCATGCAAAGAACCTTGTTGAACTCTCATTAAGGGACAGCAATATAAAGCGAGCTTGGAGGGGGAATAAGGTATTTGTCCCAAACTTGGAGATTCTAACTCTAGAAGGGTGTGTAAGCCTGGAGCTTCTTCCAAGACGCATTTATAAGTGGAAACACCTTCAAACGTTGTCTTGCAATGGCTGTTCAAAGTTAGAGAGATTTCCAGAAATCAAGGGCAATATAAGAAAGCTAAGGGTGCTTGATTTGAGTGGAACAACTACAATGGACTTACCGTCATCAATTACACATCTAAATGGTCTTCAAACTCTCCTACTTGAAGAGTGTTGA 477 0.3941 MHKLRLLKIHNLRRKLFLENHLPRDFEFPSYELRYLHWDGYPLESLPVNFHAKNLVELSLRDSNIKRAWRGNKVFVPNLEILTLEGCVSLELLPRRIYKWKHLQTLSCNGCSKLERFPEIKGNIRKLRVLDLSGTTTMDLPSSITHLNGLQTLLLEEC* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0956 158 Gene3D Ribonuclease Inhibitor 1 158 IPR032675 -
Vvi5g0956 158 SUPERFAMILY L domain-like 9 158 - -
Vvi5g0956 158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 158 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0956 Vvi-Chr5 10769951 10770678 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0956 1 156 WRKY Transcription Factor Family AT4G12020 30.952 1.87e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0956 - - vvi:100264823 311.612