Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0955 ATGGCTCGGTTTTGGATCAATTTTGGAGAATCAAATAGTGCCACTTTTTTTCAACTCTTTAAATCTGCTGCTGGGGAAGAGCAAGAGAAGGCCATAAAAGAAACAGTGGAAATACTGAAAATCATAGAAGAGAAAGGCCTTGGGGATAAGAAGTTTTTTGGAGGGGAAGCTATAGGACTGGTGGACATAGCATTTGGTTGGCACAAAACTGCTGGTTTCCACCACATTCCCTCGATTGCATGCATGGATTCAGAATTTTAA 261 0.41 MARFWINFGESNSATFFQLFKSAAGEEQEKAIKETVEILKIIEEKGLGDKKFFGGEAIGLVDIAFGWHKTAGFHHIPSIACMDSEF* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0955 86 CDD GST_C_Tau 1 68 IPR045074 GO:0004364|GO:0006749
Vvi5g0955 86 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 67 IPR045073 -
Vvi5g0955 86 Gene3D - 1 82 - -
Vvi5g0955 86 FunFam Uncharacterized protein 13 86 - -
Vvi5g0955 86 SUPERFAMILY GST C-terminal domain-like 1 68 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0955 Vvi-Chr5 10733325 10734404 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0955 2 65 Glutathione S-transferase Gene Family AT1G78340 47.143 3.02e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0955 K00799 - vvi:100244144 128.257