Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g0954 | ATGATTGGCAGGTATGAGACCGAGGTTGTCAAGGAAATTGTTGATACAATCATTAGAAGATTAAACCATCAACCTTTAAGTGTGGGAAAGAACATAGTTGGAATTGGTGTTCATTTGGAAAAATTGAAATCGTTGATGAACACTGAGTTAAATATGGTTAGTGTCGTAGGGATATATGGAATTGGTGGGGTTGGCAAGACTACTATCGCCAAGGCTATTTATAATGAGATCTCACATCAATATGATGGTAGTAGCTTTCTTATAAATATCAAAGAGAGATCCAAAGGTGATATACTTCAGTTACAGCAAGAACTTCTTCATGGTATCCTAAGGGGAAAAAATTTTAAAATAAACAATGTTGATGAAGGAATTAGTATGATAAAGAGGTGTCTAAGCTCCAATAGAGTTCTTGTTATTTTTGATGATGTGGATGAGTTGAAACAACTAGAATATTTGGCTGAAGAGAAGGATTGGTTTCGGGCAAAAAGTACAATCATCATTACATCTAGAGACAAACATGTACTTGCTCAATATGGAGCGGATATACGATATGAGGTTTCAAAATTAAACAAGGAAGAAGCTATTGAGCTCTTTAGTTTGTGGGCCTTTAAACAAAATCGTCCCCAAGAAGTTTATAAAAATCTCTCATACAATATCATAGATTATGCTAATGGCCTTCCGTTAGCACTTAAAGTTTTAGGTGCTTCTCTTTTTGGAAAGAAAATAAGTAATTGGGAAAGTGCACTGTGTAAGCTAAAAATAATGCCCCACATGGAAATTCACAATGTACTTAGAATAAGTTTTGATGGACTCGATGATATAGACAAGGGGATATTTTTGGATGTTGCATGCTTTTTCAAAGGAGATGATAGAGATTTTGTTTCAAGAATATTGGGCCCTCATGCAAAGCACGCAATAACAACTCTAGATGATAGATGTCTCATAACTGTTTCAAAAAACATGCTAGATATGCATGATTTAATACAACAAATGGGTTGGGAGATTATTCGTCAAGAATGTCCGGAAGACCCTGGAAGAAGGAGTAGATTATGCGATTCTAATGCCTATCATGTGCTAACAGGAAATAAGGGGACACGAGCAATTGAAGGACTATTCTTAGATAGATGTAAATTTAATCCATCAGAGCTTACTACAGAATCTTTCAAAGAGATGAATAGACTTAGACTGCTCAAAATCCATAACCCTCGTAGAAAGCTATTTCTTAAAGACCACCTTCCAAGGGACTTTGAATTCTATTCCTATGAGTTAGCATATCTGCATTGGGATGGATACCCTTTAGAATCTTTGCCAATGAATTTTCATGCAAAGAACCTTGTTGAACTCTCATTAAGGGACAGCAATATAAAGCAAGTTTGGAGGGGCAATAAGGTATTGTTATTATTATTTAGTTACAACTTCTCAAGTGTGCCAAACTTGGAGATTCTAACTCTAGAAGGGTGTGTAAACCTGGAGCTTCTTCCAAGAGGCATTTACAAGTGGAAACACCTTCAAACTTTGTCTTGCAATGGCTGTTCAAAGCTAGAGAGATTTCCAGAAATCAAAGGCGATATGAGAGAGCTAAGGGTGCTTGATTTGAGTGGAACAGCTATAATGGACTTACCATCATCAATTACACATCTAAATGGTCTTCAAACTCTCCTACTTCAAGAGTGTTTAAAGCTCCACCAAATCCCTAATCATATTTGCCATTTATCATCATTGAAAGAATTGGACCTAGGTCACTGCAACATAATGGAAGGAGGAATTCCTAGTGATATTTGCCATTTATCATCATTACAGAAACTAAATCTGGAACAGGGTCATTTTAGTAGCATACCTACTACCATCAATCAGCTTTCCAGGCTGGAAGTCCTTAACCTTAGTCACTGCAACAATCTTGAACAAATTCCAGAGCTTCCATCACGTCTACGGCTTTTAGATGCACATGGTTCAAATCGCACTTCATCAAGAGCCCTGTTTTTGCCATTGCATTCTCTGGTCAATTGCTTCAGTTGGGCACAGGGTTTGAAACGCACTAGTTTTAGTGATTCTTCCTACCGTGGCAAGGGAACTTGCATTGTTCTTCCCAGAACTGATGGAATTCCAGAATGGATTATGGATCGGACAAAAAGATATTTTACAGAAACAGAGCTCCCTCAGAATTGGCACCAAAATAATGAGTTTTTGGGATTTGCTCTATGTTGTGTTTATGTTCCATTTGCTTACGAATCTGAGGACATACCTGAAAAGGAATCTGCACACGGGTCCAAGAATGAATCAGCTAATAAATCTGAGGATGAATCTGCTCATACATGGGAGAATGAAACAGACGATAAATCTGTGGCTGAATCTTTTCGTAAGAATGAACATAAACATACACATCCTTGTCGTCTTAGCTGTTGTTTGGATGTGGCTGGTGATGGAGTTGAATTGGTAGATCGTTCCTTCTTTCAATCCAATTGTTTTTGCTATAAAAAAGACAAGGACGAAGATAATGAGAGTGTATCAGGTCAGACGTGGGTGATTTGCTATCCCAAGGCAGTTATTCCGGAAAGGTTTTGCTCTGATCAACGGACTTTCATTGGGTTTTCCTTTTTCGACTTTTACATTAATTCTGAGAAAGTCTTGAAAGTAAAGGAGTGTGGAGTCCGCCTTATATACTCCCAAGACCTTCAACAAAGCCATGAGGATGCAGATATTAGAATATGCAGGGCATGCCAACGGGATGGGACACCTCGGCGGAAGTGCTGTTTTAAGGGCAGTGATATGAATGAAGTACCCATTATCGAGAATCCCTTGGAACTTGATAGTTTATGTCTGCGGGATTGCAGAAATCTTACGAGTCTGCCCAGTAGCATTTTTGGTTTCAAATCCCTTGCAACTCTCTCCTGCTCTGGCTGTTCACAACTAGAGAGCTTTCCAGAAATCCTGCAAGATATGGAGAGCTTGAGAAAGCTTTATTTAAATGGAACCGCCATAAAAGAGATACCATCATCAATTCAACGTCTAAGAGGGCTTCAATATTTGCTTCTGAGAAACTGCAAAAACCTTGTGAATCTTCCTGAGAGTATTTGTAATTTGACATCTTTTAAAACTCTCGTTGTCAGTCGCTGTCCAAACTTCAACAAATTGCCAGACAACTTGGGGAGACTGCAATCTTTAGAGTATCTTTTTGTTGGGCATTTAGATTCAATGAATTTTCAATTGCCGTCTTTGTCCGGTTTATGCTCCTTGAGGACGTTAAAGCTTCAAGGCTGCAATCTAAGGGAATTTCCCAGTGAAATCTATTACCTATCATCACTGGTAACATTATCTCTGGGGGGGAACCACTTTAGTCGCATACCTGATGGGATCAGTCAACTTTATAACCTAGAAAATCTTTACTTGGGTCACTGCAAGATGCTTCAACATATTCCAGAACTTCCATCAGGTTTATTTTGTCTAGATGCCCATCACTGCACATCCCTGGAAAATTTATCCAGTCGATCAAATCTACTCTGGTCTTCTTTATTCAAATGTTTTAAATCCCAAATTCAGGTATGGTTTTCATATAGCATTTAA | 3561 | 0.383 | MIGRYETEVVKEIVDTIIRRLNHQPLSVGKNIVGIGVHLEKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKERSKGDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRILGPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLCDSNAYHVLTGNKGTRAIEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLRDSNIKQVWRGNKVLLLLFSYNFSSVPNLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFLPLHSLVNCFSWAQGLKRTSFSDSSYRGKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCVYVPFAYESEDIPEKESAHGSKNESANKSEDESAHTWENETDDKSVAESFRKNEHKHTHPCRLSCCLDVAGDGVELVDRSFFQSNCFCYKKDKDEDNESVSGQTWVICYPKAVIPERFCSDQRTFIGFSFFDFYINSEKVLKVKECGVRLIYSQDLQQSHEDADIRICRACQRDGTPRRKCCFKGSDMNEVPIIENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLENLSSRSNLLWSSLFKCFKSQIQVWFSYSI* | 1187 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g0954 | 1186 | Gene3D | - | 188 | 272 | IPR042197 | - | |
Vvi5g0954 | 1186 | Gene3D | Ribonuclease Inhibitor | 979 | 1179 | IPR032675 | - | |
Vvi5g0954 | 1186 | Gene3D | Ribonuclease Inhibitor | 365 | 521 | IPR032675 | - | |
Vvi5g0954 | 1186 | Gene3D | Ribonuclease Inhibitor | 522 | 672 | IPR032675 | - | |
Vvi5g0954 | 1186 | Gene3D | Ribonuclease Inhibitor | 917 | 978 | IPR032675 | - | |
Vvi5g0954 | 1186 | Pfam | C-JID domain | 700 | 891 | IPR045344 | - | |
Vvi5g0954 | 1186 | MobiDBLite | consensus disorder prediction | 749 | 777 | - | - | |
Vvi5g0954 | 1186 | ProSiteProfiles | Leucine-rich repeat profile. | 621 | 643 | IPR001611 | GO:0005515 | |
Vvi5g0954 | 1186 | SUPERFAMILY | "Winged helix" DNA-binding domain | 259 | 340 | IPR036390 | - | |
Vvi5g0954 | 1186 | Gene3D | - | 20 | 184 | IPR027417 | - | |
Vvi5g0954 | 1186 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 20 | 281 | IPR027417 | - | |
Vvi5g0954 | 1186 | SUPERFAMILY | L domain-like | 930 | 1161 | - | - | |
Vvi5g0954 | 1186 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 8 | 566 | IPR044974 | GO:0006952 | |
Vvi5g0954 | 1186 | SUPERFAMILY | L domain-like | 338 | 667 | - | - | |
Vvi5g0954 | 1186 | Pfam | NB-ARC domain | 43 | 253 | IPR002182 | GO:0043531 | |
Vvi5g0954 | 1186 | PRINTS | Disease resistance protein signature | 223 | 237 | - | - | |
Vvi5g0954 | 1186 | PRINTS | Disease resistance protein signature | 130 | 144 | - | - | |
Vvi5g0954 | 1186 | PRINTS | Disease resistance protein signature | 617 | 633 | - | - | |
Vvi5g0954 | 1186 | PRINTS | Disease resistance protein signature | 55 | 70 | - | - | |
Vvi5g0954 | 1186 | SMART | AAA_5 | 52 | 190 | IPR003593 | GO:0016887 | |
Vvi5g0954 | 1186 | SMART | LRR_typ_2 | 524 | 547 | IPR003591 | - | |
Vvi5g0954 | 1186 | SMART | LRR_typ_2 | 980 | 1003 | IPR003591 | - | |
Vvi5g0954 | 1186 | SMART | LRR_typ_2 | 1098 | 1121 | IPR003591 | - | |
Vvi5g0954 | 1186 | SMART | LRR_typ_2 | 1075 | 1097 | IPR003591 | - | |
Vvi5g0954 | 1186 | SMART | LRR_typ_2 | 619 | 642 | IPR003591 | - | |
Vvi5g0954 | 1186 | SMART | LRR_typ_2 | 571 | 596 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi5g0954 | Vvi-Chr5 | 10720370 | 10724354 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi5g0954 | 12 | 659 | WRKY Transcription Factor Family | AT4G12020 | 33.628 | 2.19e-80 | 288 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g0954 | - | - | vvi:100247669 | 2328.9 |