LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi5g0947	ATGGCAGGAGTGAAGCTATTAGGGTTTTGGGCAAGCCCTTTTGGTTACAGAGTGATATGGACCCTAAAACTCAAGGGCATAAACTATGAGTATATAGAGGAAGACCTTCGTAACAAGAGCCAGCTGCTGTTACACCACAATCCAGTTCACAAGAAGATTCCGGTGCTTCTTCATGGTGACAAAGCAGTAGCCGAGTCCCTTGTAATCCTCGAATACATCGAAGAAACATGGCCAGAGAATCCACTGCTGCCGACAGACGCTTATGAGAGAGCCATGGCTCGGTTTTGGATCAATTTTGGAGAATCAAAGAGTGCCACTTTTTTTCAATTCTTTAAATCCGCTGCCGGGGAAGAGCAAGAGAAGGCCATAAAAGAAACAGTGGAAATACTGAAAATCATAGAAGAGCAAAGCCTTGGGGAGAAGAAGTTTTTCGGAGGGGAAGCTATAGGACTGGTGGACATAGCATTTGGTTGGCTGGCTTACTGGTTTGAGGGCACAGAAGAAGCCGTAGGCACAAAACTGCTGAATTCCAACACATTCCCTCGATTACATGCATGGATTCAGAATTTTAAGCAAGTTCCAGTGATCAAAGAAAATTCCTGA	603	0.4461	MAGVKLLGFWASPFGYRVIWTLKLKGINYEYIEEDLRNKSQLLLHHNPVHKKIPVLLHGDKAVAESLVILEYIEETWPENPLLPTDAYERAMARFWINFGESKSATFFQFFKSAAGEEQEKAIKETVEILKIIEEQSLGEKKFFGGEAIGLVDIAFGWLAYWFEGTEEAVGTKLLNSNTFPRLHAWIQNFKQVPVIKENS*	201

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi5g0947	200	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	86	200	IPR010987	-
	Vvi5g0947	200	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	6	193	IPR045073	-
	Vvi5g0947	200	CDD	GST_N_Tau	4	77	-	-
	Vvi5g0947	200	Pfam	Glutathione S-transferase, C-terminal domain	110	191	IPR004046	-
	Vvi5g0947	200	FunFam	Tau class glutathione S-transferase	1	85	-	-
	Vvi5g0947	200	SUPERFAMILY	Thioredoxin-like	4	102	IPR036249	-
	Vvi5g0947	200	Gene3D	-	83	200	-	-
	Vvi5g0947	200	Pfam	Glutathione S-transferase, N-terminal domain	4	74	IPR004045	-
	Vvi5g0947	200	SFLD	Glutathione Transferase (cytosolic)	2	199	IPR040079	-
	Vvi5g0947	200	Gene3D	Glutaredoxin	1	82	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi5g0947	Vvi-Chr5	10543189	10544181	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi5g0947	4	198	Glutathione S-transferase Gene Family	AT2G29420	47.179	2.59e-62	191

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi5g0947	K00799		-	vvi:100852746	410.609

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