Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0947 ATGGCAGGAGTGAAGCTATTAGGGTTTTGGGCAAGCCCTTTTGGTTACAGAGTGATATGGACCCTAAAACTCAAGGGCATAAACTATGAGTATATAGAGGAAGACCTTCGTAACAAGAGCCAGCTGCTGTTACACCACAATCCAGTTCACAAGAAGATTCCGGTGCTTCTTCATGGTGACAAAGCAGTAGCCGAGTCCCTTGTAATCCTCGAATACATCGAAGAAACATGGCCAGAGAATCCACTGCTGCCGACAGACGCTTATGAGAGAGCCATGGCTCGGTTTTGGATCAATTTTGGAGAATCAAAGAGTGCCACTTTTTTTCAATTCTTTAAATCCGCTGCCGGGGAAGAGCAAGAGAAGGCCATAAAAGAAACAGTGGAAATACTGAAAATCATAGAAGAGCAAAGCCTTGGGGAGAAGAAGTTTTTCGGAGGGGAAGCTATAGGACTGGTGGACATAGCATTTGGTTGGCTGGCTTACTGGTTTGAGGGCACAGAAGAAGCCGTAGGCACAAAACTGCTGAATTCCAACACATTCCCTCGATTACATGCATGGATTCAGAATTTTAAGCAAGTTCCAGTGATCAAAGAAAATTCCTGA 603 0.4461 MAGVKLLGFWASPFGYRVIWTLKLKGINYEYIEEDLRNKSQLLLHHNPVHKKIPVLLHGDKAVAESLVILEYIEETWPENPLLPTDAYERAMARFWINFGESKSATFFQFFKSAAGEEQEKAIKETVEILKIIEEQSLGEKKFFGGEAIGLVDIAFGWLAYWFEGTEEAVGTKLLNSNTFPRLHAWIQNFKQVPVIKENS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0947 200 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 200 IPR010987 -
Vvi5g0947 200 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 193 IPR045073 -
Vvi5g0947 200 CDD GST_N_Tau 4 77 - -
Vvi5g0947 200 Pfam Glutathione S-transferase, C-terminal domain 110 191 IPR004046 -
Vvi5g0947 200 FunFam Tau class glutathione S-transferase 1 85 - -
Vvi5g0947 200 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Vvi5g0947 200 Gene3D - 83 200 - -
Vvi5g0947 200 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Vvi5g0947 200 SFLD Glutathione Transferase (cytosolic) 2 199 IPR040079 -
Vvi5g0947 200 Gene3D Glutaredoxin 1 82 - -
Vvi5g0947 200 SFLD Main.3: Omega- and Tau-like 2 199 IPR045073 -
Vvi5g0947 200 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vvi5g0947 200 FunFam Uncharacterized protein 104 191 - -
Vvi5g0947 200 CDD GST_C_Tau 87 199 IPR045074 GO:0004364|GO:0006749
Vvi5g0947 200 SUPERFAMILY GST C-terminal domain-like 75 199 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0947 Vvi-Chr5 10543189 10544181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0947 4 198 Glutathione S-transferase Gene Family AT2G29420 47.179 2.59e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0947 K00799 - vvi:100852746 410.609