Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0945 ATGGCAGAAGTGAAGCTCCTGGGGTTTTGGGCGAGCCCATTCAGTGACAGAGTGATATGGGCTCTAAAACTGAAGGGTATAAACTATGAGTATGTAGAAGAAGACCCTTACAACAAGACCCAACTGCTTTTACAGCATAACCCAGTTCATAAGAAGGTTCCTGTGCTTATTCATGCTGGCAAACCAATTGCCGAGTCTTCCATGATCCTTGAATACATTGAAGAAACATGGCCACAGAATCCACTACTGCCTCAAGGTGCTTACGAGAGAGCCATGGCTCGTTTTTGGATCAAATTTGGTGAAGAAAAGATGGCCACCATTTGTGCAGTCTTGAGAACTTCCGGAGCAGAACAAGAGAGGGCAACAAAAGAAGCGATGGAACTGCTGAAAATCTTAGAAGAGCAAGGTCTTGGGGACAAGAAGTTCTTTGGTGGGGATGCCATAGGACTGGCAGACATAGCGTTTGGTTGGCTTGCTTACTTATTTGGAGTCATAGAAGAAGTAGCAGGTGTTAAAGTGCTGGATGCAAACAGATTACCTCGACTGCATGCATGGATTGACAATCTTAAGGAAGTTCCTGTGATCAAAGAAAATCTGCCCGACCGCCAGAAACTGTTGGGACACCTGAAACGCAGAAGGGAGACTCACCTCGCACTTCCAAATTGTAATAACTAG 675 0.4533 MAEVKLLGFWASPFSDRVIWALKLKGINYEYVEEDPYNKTQLLLQHNPVHKKVPVLIHAGKPIAESSMILEYIEETWPQNPLLPQGAYERAMARFWIKFGEEKMATICAVLRTSGAEQERATKEAMELLKILEEQGLGDKKFFGGDAIGLADIAFGWLAYLFGVIEEVAGVKVLDANRLPRLHAWIDNLKEVPVIKENLPDRQKLLGHLKRRRETHLALPNCNN* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0945 224 CDD GST_N_Tau 4 77 - -
Vvi5g0945 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 205 IPR045073 -
Vvi5g0945 224 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Vvi5g0945 224 Gene3D - 86 219 - -
Vvi5g0945 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 217 IPR010987 -
Vvi5g0945 224 FunFam Tau class glutathione S-transferase 83 219 - -
Vvi5g0945 224 SFLD Main (cytGST) 1 217 - -
Vvi5g0945 224 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Vvi5g0945 224 Pfam Glutathione S-transferase, C-terminal domain 117 187 - -
Vvi5g0945 224 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vvi5g0945 224 FunFam Tau class glutathione S-transferase 1 85 - -
Vvi5g0945 224 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Vvi5g0945 224 Gene3D Glutaredoxin 1 85 - -
Vvi5g0945 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vvi5g0945 224 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0945 Vvi-Chr5 10533654 10534641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0945 3 214 Glutathione S-transferase Gene Family AT2G29420 47.887 4.75e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0945 K00799 - vvi:100852677 457.988