Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0882 ATGGCGAGTGAGGCGGCAGGGATGGAGAGCGGCGCAGCAGGGATGGAGAGCGGCGCAGCACCAACGGAGGCGGCCAAGCAGCCACACAGGCTGGAGAGGAAGTGGACCTTCTGGTTCGATAACCAGTCCAAGCCCAAGCAAGGCGCGGCTTGGGGGACCTCTCTTCGCAAGGCTTACACCTTCGAAACCGTCGAAGAATTTTGGTGTCTGTATGATCAGATATTTAAGCCCAGCAAGTTGCCAGCCAATGCAGATTTCCATTTGTTCAAAGCTGGGGTTGAACCAAAATGGGAAGATCCTGAGTGTGCAAATGGAGGCAAATGGACTGTTGCCAGCAGCCGAAAGGGTAATCTTGATACCATGTGGCTAGAAACGTTGATGGCCTTAATTGGGGAGCAATTTGATGAGGCTGATGAAATATGTGGTGTGGTTGCAAGTGTACGTCAAAGGCAGGATAAGCTTGCTCTGTGGACTAAGACAGCAACCAACGAGGCTGCTCAGATGAGCATTGGAAGGAAGTGGAAGGAGGTCATTGATGTCACTGATAAGATCACTTACAGCTTTCATGATGATTCCAGAAGGGAAAGATCAGTCAAAGTTCGATACAACGTGTGA 615 0.5057 MASEAAGMESGAAGMESGAAPTEAAKQPHRLERKWTFWFDNQSKPKQGAAWGTSLRKAYTFETVEEFWCLYDQIFKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVASSRKGNLDTMWLETLMALIGEQFDEADEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEVIDVTDKITYSFHDDSRRERSVKVRYNV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0882 204 FunFam Eukaryotic translation initiation factor 4E 20 204 - -
Vvi5g0882 204 Gene3D RNA Cap, Translation Initiation Factor Eif4e 20 204 IPR023398 -
Vvi5g0882 204 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 22 195 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi5g0882 204 SUPERFAMILY eIF4e-like 22 196 IPR023398 -
Vvi5g0882 204 Pfam Eukaryotic initiation factor 4E 31 185 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi5g0882 204 MobiDBLite consensus disorder prediction 1 28 - -
Vvi5g0882 204 ProSitePatterns Eukaryotic initiation factor 4E signature. 85 108 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0882 Vvi-Chr5 9209094 9219633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0882 22 196 Eukaryotic Initiation Factors Gene Family AT5G35620 74.860 1.82e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0882 K03259 - vvi:100259631 407.527