Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0844 ATGGCTCCAACACCCTCTTCCAAGTCAAACCACGCCCAAGTGACCCAGATGAAAACGCCAAATTCGAAGCATCGGCTTCATTTCAATGGGGGAAAAGTCACACAGCCATCTCCAAACCCACATTCAGTAGCCAAAGAGACCCCTCCGGCAGAGCACCCGGTTGAAGTCATTGGCCGAATCCGTGATTACCCGGACCGGAAAGACAAACCCTTGTCGATTTTGCACATCAATCCCGATCGGCAGACTGTCCGGGTTCGCACAGATATTGGGTACCGCGACTTCAGCCTTGATGGGGTTTCATTGTCAGAGGAAGAAGATATCGATGGATTCTACAAAAAGTTTGTGGAGTCCAGGATTAATGGTGTGAAAATGGGTGAAAAATGCACTATCATGATGTATGGACCAACTGGTTCGGGGAAGAGCCATACTATGTTTGGGTGTTCTAAGCAGCCGGGTATTGTGTACAGATCTTTGAAAGATATTTTGGGGGGAGCAGATGAAGAAAATGATGGCAACGAGCAGCGCGTCGGTGTTGGAACTTTTGTTCAAGTCACTGTTTTGGAGATATATAATGAAGAGATTTATGATCTTCTGTCAAGCAATACCGGTGGAGGGTTGAATCTTGGGTGGGCTAAGGGCGGTTCTTCAAAGGTGAGACTAGAAGTAATGGGAAAGAAGGCCAAGAATGCAACCTTTATATCTGGAACTGAAGCCGGAAAGATATCTAAAGAGATCCAAAAAGTGGAGAAGCGAAGAATTGTTAAAAGCACACTCTGTAATGACAGAAGCTCCAGAAGCCACTGCATGATAATCCTTGATGTCCCTACTGTGGGAGGAAGGTTGATGCTTGTTGACATGGCTGGTTCTGAAAATATTGAGCAAGCTGGTCAAACTGGATTGGAAGCAAAAATGCAGACAGGAAAGATCAACCAGGGAAATATAGCATTGAAAAGAGTAGTCGAGTCCATAGCAAATGGTGATTCTCATGTGCCGTTCAGAGATAGCAAGTTAACCATGCTTCTACAGGATTCGTTCGAAGATGATAAATCAAAAATTTTAATGATATTATGTGCAAGCCCTGATCCCAAGGAGATACACAAGACAATCTCCACCCTTGAGTATGGTGCAAAAGCAAAATGTATTGTTCGTGGTCCTCATACACCAGTGAATGATAAAGTCGGTACTGAAGATTCTTCATCAGGAGTTATTTTAGGATCAAGAATCGCTGCCATGGACCAGTTCATTTATAAGTTGCAAATGGAGAACAAGCTACGGGAGAAGGAGCGGAATGAAGCCCATAAAGCGCTTCTGAAGAAAGAAGAAGAAGTTGCAGCATTGAGAGCTAAAATTGAGCTCATGGAAGGGAAGGAATCAGGGATAAGTGAAGAGGTGATCAACTTCAAGGTGAATGAGCGCACCCAATTTTTGAAGCATGAGTTGGAAAAGAAGCTGCAAGAGTGCCAGAGTATGGCGAATGAGTTTGTGGAACTGGGTAGGAAGCGGATGGAAGAAAAAATATTGCAACAGCAACAGGAGGTTGAATTGCTGAGGTATCGTCTGGAGGAGATTGAATCTGAGCTGTTCTTTTCAAGGAGCATAAATGGTAAGGTAAATGTGTCAAGGGACCTAGAAGGGAACGGCTTTGCCAAAAGGCTAGTTGAGATTTATGCTGATGAGGACCCTGGGATGGTGAAGTCTATGGATCTGGACATGGGTGATCAGGAACCATATGTTCGTGATGTGAGACATATAGATAGGGGTGTTCATCAGCTCAATAATAATGTCAACCAAGGCTTTCTGAATCATCTTCATCAAAATATTTTGAATGAGGAAGTTGATGATGATGTTTTTGCAGCCAAGTATGGTGACAGAGTATGCTTGAGCACTGTGTTTGAGGATGAAGAGGCAGAAGAAGACGAAGAACATAAAGGGAATTTGGAGGATGAAGAAGTGATGAAAGAAATAATAGAGGAAAAGACCGTGTGCTCTGGCGGGATGGATGGCTCTGGTCTCAAGATCAATTTTAATACAGGGTCTTTTTCATCATCTCCTCTGAATCTGGAGAAGCTTGTTGGTTCAGGACTAGTAAGTGAGCCTGAAAATGCTAAAGATGCAGCCTCTTCAAGACGGAAAAGAATTCAAAATATATTCACACTCTGTGGGAATCAGAGAGAGATTTCTCACCATACAAAGGTGGCCCCTGGAAGGTGTGAAACTTTTGATCCTCAGTCATCCCCAGTGAAAAAAACTGGGGATGATTCTGCCACGACTACTTTGCCAGAGGAACTCTTGCAAGTTCAAAAAAGTGGATCTGTACCAGAATCTGGAATTGAAAATCAAATTCCTTGTGATGTAACTGTGAAAGGAATATCATTTGCAACGGTTAAACTTGCAAATGAGCAGAAGCTGATAGAAGCCCAGATGAACAGAAGCCGAGCATCTGATGACATGGCACTGGCTTCAAAGGAGAATCTCAACCCAGTAAATGAAGATACTGGTGCTATGACTGAAGTGTATGTGAAATGGGAGGCATCAAAAGAAAATCCAGGCAAATTCATTACCACGCTCAAGGTTCTAAGGGATTCAAGCCTTGCTGACCTACGAAAGCTGATTGAAATCCACCTTGGAGAGGATAAGCAGCAAGCATTTACATTTCTTGTGCTTGGGGATCCTACTGGAGCTCCAGTACCCAGAGAGAAGGAAGCAACGGTACGAACAAGCAAGCTTCCAATTTGCAACAATCAAATACGAGGACACCTAGCCTGCTTGCGGCCAGTGAAAGGAATCCAAAGCCCTGCTCATCATCTCCCTTTGAGCCCACTAGAAAACAAATTACCCCTCACTCCGAATTCCTGTTTCATGCAGCAAGGAGATGGTTTTTCGCCCCAAGTTGCTCATCACTTGACTCCCACTCCCTTCATTAATATGAGGAAGAGATATTAG 2943 0.4383 MAPTPSSKSNHAQVTQMKTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHPVEVIGRIRDYPDRKDKPLSILHINPDRQTVRVRTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESRINGVKMGEKCTIMMYGPTGSGKSHTMFGCSKQPGIVYRSLKDILGGADEENDGNEQRVGVGTFVQVTVLEIYNEEIYDLLSSNTGGGLNLGWAKGGSSKVRLEVMGKKAKNATFISGTEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQTGLEAKMQTGKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVNDKVGTEDSSSGVILGSRIAAMDQFIYKLQMENKLREKERNEAHKALLKKEEEVAALRAKIELMEGKESGISEEVINFKVNERTQFLKHELEKKLQECQSMANEFVELGRKRMEEKILQQQQEVELLRYRLEEIESELFFSRSINGKVNVSRDLEGNGFAKRLVEIYADEDPGMVKSMDLDMGDQEPYVRDVRHIDRGVHQLNNNVNQGFLNHLHQNILNEEVDDDVFAAKYGDRVCLSTVFEDEEAEEDEEHKGNLEDEEVMKEIIEEKTVCSGGMDGSGLKINFNTGSFSSSPLNLEKLVGSGLVSEPENAKDAASSRRKRIQNIFTLCGNQREISHHTKVAPGRCETFDPQSSPVKKTGDDSATTTLPEELLQVQKSGSVPESGIENQIPCDVTVKGISFATVKLANEQKLIEAQMNRSRASDDMALASKENLNPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLADLRKLIEIHLGEDKQQAFTFLVLGDPTGAPVPREKEATVRTSKLPICNNQIRGHLACLRPVKGIQSPAHHLPLSPLENKLPLTPNSCFMQQGDGFSPQVAHHLTPTPFINMRKRY* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0844 980 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 388 IPR027417 -
Vvi5g0844 980 PANTHER KINESIN-RELATED 77 724 IPR027640 GO:0003777|GO:0007018
Vvi5g0844 980 Pfam Kinesin motor domain 87 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0844 980 MobiDBLite consensus disorder prediction 1 52 - -
Vvi5g0844 980 Gene3D Kinesin motor domain 32 384 IPR036961 -
Vvi5g0844 980 Coils Coil 420 456 - -
Vvi5g0844 980 Coils Coil 477 497 - -
Vvi5g0844 980 MobiDBLite consensus disorder prediction 743 759 - -
Vvi5g0844 980 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 35 386 - -
Vvi5g0844 980 PRINTS Kinesin heavy chain signature 125 146 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0844 980 PRINTS Kinesin heavy chain signature 330 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0844 980 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0844 980 PRINTS Kinesin heavy chain signature 280 298 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0844 980 MobiDBLite consensus disorder prediction 734 759 - -
Vvi5g0844 980 MobiDBLite consensus disorder prediction 1 23 - -
Vvi5g0844 980 ProSiteProfiles Kinesin motor domain profile. 53 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g0844 980 Coils Coil 499 526 - -
Vvi5g0844 980 SMART kinesin_4 51 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0844 Vvi-Chr5 8610024 8614480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0844 102 392 Calmodulin-binding Proteins AT5G65930 28.094 7.08e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0844 - - vvi:100264847 1909.42