Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi5g0823 | ATGGCAGATCCTGTTAGTTATGGGAATTCTGAGCGTGACATCGAGCAAGCACTTGTTACTTTGAAAAAAGGGACTCAGCTAATCAAGTACAGCCGGAAAGGGAAGCCCAAGTTTCGTCCATTCAGAATCTCTACAGATGAAACGACATTGATCTGGTATTCACATGGAGAAGAAAGAAATTTGAAACTATCTTCTGTATCACGGATTATCCCTGGACAGAGAACTGCTGTTTTTAGAAGATATTTGCGCCCTGAAAAAGATTATTTATCATTTTCACTTCTATACAATAACGGTGAAAGATCTCTTGATCTGATCTGCAAGGACAAAGTTGAAGCTGAAGTTTGGCTTGCGGGTCTCCAGGCATTAATTTCTACTGGACAACATCGTAATAGACGCACCAGAAGTGACATTCCCGATGTGAGAATTTCATTTCAACATCAATATATTTATGCTTATTCTCGTGACTCTTCTTTGAATTGGGCGAGCTCAGATGCGGGGTCAGAACGCACAAATATGCAACTAAGAACAAGTGGAGTGGATGGTTTCCGGATTAGTGTTTCGAGCACTCCTAGCTGCTCAAGTCAAGGTTCTGGACCAGATGACATAGAATCGTTGGGTGATGTTTATGTCTGGGGAGAGGTATGGTGTGATGGGGTTTTACCTGATGGATCAGTGAGCCCATTCCCTATAAAAATAGATGTTCTGACTCCAAAATCCTTGGAGTCAAATGTGGTTCTAGATGTTCATCAGATTGCTTGTGGTGTTCGGCATGTTGCTCTTGTTACCAGGCAAGGAGAAGTTTTCACCTGGGGGGAGGAATCTGGTGGGAGACTTGGCCATGGAATAGATAACGACTTCAGTCGCCCTCATCTTGTTGAATTTCTAGCAGTAAATAATGTGGACTTTGTTGCATGTGGTGAGTATCATACATGTGCTGTATCTACATCCGGTGATTTATTTACCTGGGGTGATGGTACTCATAATGCTGGACTTCTTGGTCATGGCACTGAGGTTAGCCACTGGATACCAAAAAGAGTTTCTGGTCCTTTAGAAGGACTTCAGGTTTTATCTGTTGCATGTGGCACATGGCACTCAGCACTGGCAACTTCCAATGGGAAACTCTTTACATTTGGTGATGGAACTTTTGGTGTTCTAGGCCATGGAGATCGAGAAAGTGTTCCATATCCAAGGGAGGTTCAAATATTAAGTGGACTAAAGACGATTAAGGTTGCATGTGGAGTATGGCATACAGCAGCTATCATAGAGGTTATGAGCCAGTCTGGTACAAATATTTCATCTAGAAAGTTGTTCACCTGGGGTGATGGTGATAAACACCGTTTAGGTCATGGAAGCAAGGAAACTTACCTGCTTCCGACTTGTGTCTCTGCACTTATTGACTATAATTTCCATCAGCTGGCATGTGGACATACTATGACTGTTGCCCTCACTACATCAGGACATGTGTTCACAATGGGTGGTACTGCATATGGTCAACTAGGAAATCCACTTTCTGATGGGAGATTACCTTGTTTGGTACAAGATAAATTGGTCGGTGAGTTTGTTGAAGAAATTTCATGTGGGGCCTATCATGTTGCTGTGCTGACATCAAGAAGTGAAGTATTCACTTGGGGAAGAGGTGCCAATGGAAGATTGGGACATGGGGACACAGAAGATAGGAGATCTCCAACATTTGTCGAAGCGCTAAAAGATAGGAATGTAAAAAGCATATCATGTGGTTCCAATTTCACTGCAAGTATTTGCATTCATAAGTGGGTCTCTGGAGCAGACCAATCAGTTTGCTCTGGTTGCAGGCAGGCATTTGGTTTTACCAGGAAGCGGCACAACTGCTACAACTGTGGGCTAGTGCATTGCCATGCTTGCAGTTCCAAAAAGGCATTAAAAGCTGCATTGGCTCCAACTCCAGGCAAACCGCATCGAGTATGTGACCCTTGCTATGCAAAACTCAAAGCAGCTGAGGCTGGAGATGCCTCTATTTTTAATAGGAAAAACACTGTCCCCCGCCGATCAATAGATGCAACAATCAGGTCAGATAGAGGAGAGGTAAGGTCTGCAAGGATTCTGATGTCTCCTGGACCAATCAATTATTTTGAATTTAAACCAGCAAGGCTTGGGCCAAGACCAGATCCTTCTCCCATGATCCAATCTTCCCAAGGTCCATCACTTCTTAAAGACATTGCATTTCCAAGTTCACTGAGTGCTCTTCAAAATGCTTTAAAGCCTGTTATTACAGCATCACCTCAGACTGCACCTCCACCTCCACCTCAGCCGGCATTCTCAAGACCTGTTTCACCATACTCTAGGAGACCAAGCCCTCCACGCTCTGCTGGTCCTGTATTTTCAAGGAGTGTAATTGATAGTCTCAAGAAGACAAATGAGCTACTAAATCAAGAAGTAACAAAGCTGCAAAACCAAGTTAGAAGTTTGAAGCAGAAGTCAGAAGGTCAAGATGCAGAGATTCAGAAATTACGTAAAAATGCCCAAGAAGCTGATTTGTTGGCTCTGGAAGAATCTTCTAAATGCACGGTAGCAAAGGAAGTTGTCAAGTCCATCACAACACAGCTTAAAGAAATGGAAAAGCAGTTACCTCCTGAGGTCTATGACAGTGAAACCTTTAAATCTATGCAAACTCAAATTGAAGCTTTTCTAAATACCAGTGGAACTCAAGCAGCCGAATTTTCATCTTCTTTACCAGCAGACTTGGAATCTGACCAGAAAAATGCCCCTGTTACCAATCCCTTGGGTGTGGAGGATCATGTAAATGCTGCAGGGCTTACAGACCTAACACAGAATGGTGAAAGCTCTGTACAGGACAGCAGTAAATTATCCATTTCAATTACAAGAGATGCTGTGCCTCAACAAAGCACAGAAAATGGCTCAAGATCAGCAGCAAAATATGAAGGAGAACCAGAAAGTACTGAACAATTTGAGCCTGGTGTTTATGTGACTTTCATTGCACTCAAAAATGGTACCAAGATCTTCAAGAGAGTTAGATTCAGCAAACGGAAGTTTGGCGGCCAACAGGCAGAAGAATGGTGGAAGGAAAACAAAGAAAGGCTTCTTAGGAAGTACACCCCACCAGCATCAAGCAGTGCTCCAACTGGGTCATCGGTTCCTCCAGCACCAACAGATGAAAGTAATGAGTTGGCACAATCTTCCCAAACTTAG | 3186 | 0.4325 | MADPVSYGNSERDIEQALVTLKKGTQLIKYSRKGKPKFRPFRISTDETTLIWYSHGEERNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLICKDKVEAEVWLAGLQALISTGQHRNRRTRSDIPDVRISFQHQYIYAYSRDSSLNWASSDAGSERTNMQLRTSGVDGFRISVSSTPSCSSQGSGPDDIESLGDVYVWGEVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKLKAAEAGDASIFNRKNTVPRRSIDATIRSDRGEVRSARILMSPGPINYFEFKPARLGPRPDPSPMIQSSQGPSLLKDIAFPSSLSALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITTQLKEMEKQLPPEVYDSETFKSMQTQIEAFLNTSGTQAAEFSSSLPADLESDQKNAPVTNPLGVEDHVNAAGLTDLTQNGESSVQDSSKLSISITRDAVPQQSTENGSRSAAKYEGEPESTEQFEPGVYVTFIALKNGTKIFKRVRFSKRKFGGQQAEEWWKENKERLLRKYTPPASSSAPTGSSVPPAPTDESNELAQSSQT* | 1062 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi5g0823 | 1061 | MobiDBLite | consensus disorder prediction | 899 | 916 | - | - | |
| Vvi5g0823 | 1061 | MobiDBLite | consensus disorder prediction | 899 | 921 | - | - | |
| Vvi5g0823 | 1061 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 177 | 423 | - | - | |
| Vvi5g0823 | 1061 | SUPERFAMILY | RCC1/BLIP-II | 205 | 591 | IPR009091 | - | |
| Vvi5g0823 | 1061 | ProSiteProfiles | BRX domain profile. | 976 | 1031 | IPR013591 | - | |
| Vvi5g0823 | 1061 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 434 | 485 | IPR000408 | - | |
| Vvi5g0823 | 1061 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 317 | 371 | IPR000408 | - | |
| Vvi5g0823 | 1061 | ProSiteProfiles | Zinc finger FYVE/FYVE-related type profile. | 594 | 656 | IPR017455 | - | |
| Vvi5g0823 | 1061 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 206 | 264 | IPR000408 | - | |
| Vvi5g0823 | 1061 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 57 | 862 | - | - |
Showing 1 to 10 of 49 entries
Duplication type information
Functional genes information
Pathway information