Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0819 ATGGCGCAGCAGGAAGTAAAGCTTTTGGGGTTCTGGGCTAGCCCGTTTGCCTACCGGGTGATATGGGCATTGAAGCTGAAGGGGGTCGATTACGAGTACATTGAAGAAGATGTCTTCAACAAGAGCCCTCTTCTCCTGCAACTCAACCCCCTTCATAAGAGGGTCCCAGTGCTCATTCATGGCCACAGAGTCATCTGCGAGTCATATGTTATCGTCCAGTATATCGATGAGACCTGGCCTCAGTACCCATTACTCCCACAACACCCTTATGAACGAGCCATGGCGAGGTTCTGGGCTGAGTTTGCTGAAAGCAAGCTGTTTGAGAGTGCATGGATGGCCTTATGCTCTCGAGGAGAGGAGCGAGAACGGGCAGCGAAGTTGGCGATGGAGGCTGTTGAAAAGATAGAGGAATTGGTGAAAGGAAAGAAGCTGTTTGGGGGAGAGAGCATCGGGTATCTGGACATTTGTTTGGGATGGATCTCTTACTGGCTGCCTATTTGGGAGGAAGTTGGGTGCATGCAGATCATAGACCCCATTAAGTTTCCTGCTACCAGTTCATGGATCGACACAGTTCTTCATCACCCAGTGATCAGGGACAACTTACCTGCCCGCGAAGCCATGATCGTGTATTTCCAGAAACGCAGCAAAGACATATATGAATCACGCACTGGTTTAAGGGTTTAA 684 0.4971 MAQQEVKLLGFWASPFAYRVIWALKLKGVDYEYIEEDVFNKSPLLLQLNPLHKRVPVLIHGHRVICESYVIVQYIDETWPQYPLLPQHPYERAMARFWAEFAESKLFESAWMALCSRGEERERAAKLAMEAVEKIEELVKGKKLFGGESIGYLDICLGWISYWLPIWEEVGCMQIIDPIKFPATSSWIDTVLHHPVIRDNLPAREAMIVYFQKRSKDIYESRTGLRV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0819 227 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vvi5g0819 227 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Vvi5g0819 227 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi5g0819 227 SFLD Main (cytGST) 2 220 - -
Vvi5g0819 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 197 IPR045073 -
Vvi5g0819 227 Gene3D - 85 221 - -
Vvi5g0819 227 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Vvi5g0819 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi5g0819 227 CDD GST_N_Tau 6 79 - -
Vvi5g0819 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Vvi5g0819 227 FunFam Tau class glutathione S-transferase 85 221 - -
Vvi5g0819 227 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vvi5g0819 227 Gene3D Glutaredoxin 1 84 - -
Vvi5g0819 227 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0819 Vvi-Chr5 8146893 8147700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0819 3 214 Glutathione S-transferase Gene Family AT2G29420 42.453 8.44e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0819 K00799 - vvi:100251134 473.011