Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0818 ATGGCGCAGCAGGAAGTAAAGCTTTTGGGGTTCTGGGCTAGCCCGTTTGCCTACCGGGTGATATGGGCATTGAAGCTGAAGGGGGTCGATTACGAGTACATTGAAGAAGATGTCTTCAACAAGAGCCCTCTTCTCCTGCAACTCAACCCCCTTCATAAGAGCGTCCCAGTACTCATTCATGGCCACAGAGTCATCTGCGAGTCATTTGTTATCGTCCAGTATATCGATGAGACCTGGCCTCAGTACCCATTACTCCCACAACACCCTTATGAACGAGCCATGGCGAGGTTCTGGGCGGAGTTTGCTGAAAGCAAGCTGATGGAGAGTGCATGGATGGGCCAATGCTCTCGAGGAGAGGAGCGAGAACGGGCAGCGAAGTTGGCGATGGAGACTGTTGAAAAGATAGAGGAATTGGTGAAAGGGAAGAAGCTGTTTGGGGGAGAGAGCATCGGGTATCTGGACATTTGTTTGGGATGGCTCTCTTACTGGCTGCCTATTTGGGAGGAAGTTGGGTGCATGCAGATCATAGACCCCATTAAGTTTCCTGCTACCAGTTCATGGATCGACACAGTTCTTCATCACCCAGTGATCAGGGACAACTTACCTGCCCGCGAAGCCATGATCGTGTATTTCCAGAAACGCCGCAAAGACATATATGAATCACGCACTGGTTTAAGGGTTTAA 684 0.5029 MAQQEVKLLGFWASPFAYRVIWALKLKGVDYEYIEEDVFNKSPLLLQLNPLHKSVPVLIHGHRVICESFVIVQYIDETWPQYPLLPQHPYERAMARFWAEFAESKLMESAWMGQCSRGEERERAAKLAMETVEKIEELVKGKKLFGGESIGYLDICLGWLSYWLPIWEEVGCMQIIDPIKFPATSSWIDTVLHHPVIRDNLPAREAMIVYFQKRRKDIYESRTGLRV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0818 227 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vvi5g0818 227 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Vvi5g0818 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi5g0818 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Vvi5g0818 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 197 IPR045073 -
Vvi5g0818 227 SFLD Main (cytGST) 2 220 - -
Vvi5g0818 227 Gene3D Glutaredoxin 1 84 - -
Vvi5g0818 227 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vvi5g0818 227 CDD GST_N_Tau 6 79 - -
Vvi5g0818 227 Gene3D - 85 221 - -
Vvi5g0818 227 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vvi5g0818 227 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi5g0818 227 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vvi5g0818 227 FunFam Tau class glutathione S-transferase 85 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0818 Vvi-Chr5 8137438 8138245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0818 3 214 Glutathione S-transferase Gene Family AT2G29420 42.453 3.64e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0818 K00799 - vvi:100256292 473.781