Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0817 ATGGCGCAGCAGGAAGTAAAGCTTTTGGGGTTCTGGGCTAGCCCGTTTGCCTACCGGGTGATATGGGCATTGAAGCTGAAGGGGGTCGATTACGAGTACATTGAAGAAGATATCTTCAACAAGAGCCCTCTTTTCCTGCAACTCAACCCCCTTCATAAGAGGGTCCCAGTGCTCATTCATGGCCACAGAGTCATCTGCGAGTCATATGTTATCGTCCAGTATATCGATGAGACCTGGCCTCAGTACCCATTACTCCCACAACACCCTTATGAACGAGCCATGGCGAGGTTCTGGGCTGAGTTTGCTGAAAGCAAGGTAACTTCTACTGCAACTCCCCTAATTTATATTGTTTTCCATCTAACTGCATGGATGGGCATATGCTCTCGAGGAGAGGAGCGAGAACGGGCAGCGAAGTTGGCGATGGAGGCTATTGAAAAGATAGAGGAATTGGTGAAAGGGAAGAAGCTGTTTGGGGGAGAGAGCATCGGGTATCTGGACATTTGTTTGGGATGGATCTCTTATTGGCTGCCTATTTGGGAGGAAGTTGGGTGCATGCAAATGATAGACCCCATTAAGTTTCCTGCTACCAGTTCATGGATCGACACAGTTCTTCATCACCCAGTGATCAGGGACAACTTACCTGCCCGCGAAGCCATGATCGTGTATTTCCAGAAACGCAGCAAAGACATATATGAATCACGCACTGGTTTAAGGGTTTAA 720 0.4819 MAQQEVKLLGFWASPFAYRVIWALKLKGVDYEYIEEDIFNKSPLFLQLNPLHKRVPVLIHGHRVICESYVIVQYIDETWPQYPLLPQHPYERAMARFWAEFAESKVTSTATPLIYIVFHLTAWMGICSRGEERERAAKLAMEAIEKIEELVKGKKLFGGESIGYLDICLGWISYWLPIWEEVGCMQMIDPIKFPATSSWIDTVLHHPVIRDNLPAREAMIVYFQKRSKDIYESRTGLRV* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0817 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi5g0817 239 CDD GST_C_Tau 89 226 IPR045074 GO:0004364|GO:0006749
Vvi5g0817 239 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 209 IPR045073 -
Vvi5g0817 239 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vvi5g0817 239 FunFam Tau class glutathione S-transferase 85 233 - -
Vvi5g0817 239 SFLD Main.3: Omega- and Tau-like 2 232 IPR045073 -
Vvi5g0817 239 SUPERFAMILY GST C-terminal domain-like 77 227 IPR036282 -
Vvi5g0817 239 Gene3D - 85 232 - -
Vvi5g0817 239 CDD GST_N_Tau 6 79 - -
Vvi5g0817 239 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi5g0817 239 Gene3D Glutaredoxin 1 84 - -
Vvi5g0817 239 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 223 IPR010987 -
Vvi5g0817 239 SFLD Main (cytGST) 2 232 - -
Vvi5g0817 239 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0817 Vvi-Chr5 8118410 8119129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0817 3 226 Glutathione S-transferase Gene Family AT2G29420 40.625 1.31e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0817 K00799 - vvi:100251134 451.055