Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0805 ATGGCCAAGAATCAATTGCAAGTGCTTAACGCACTTGATGTAGCCAAAACACAATGGTATCATTTCACGGCGATTGTCATTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTCTTCTGTATATCATTGGTCACAAAATTGTTGGGTCGCATATACTACCATTCTCCTGGGGATGCTAAGCCCGGCACTTTGCCTCCAAATGTGTCGGCTGCAGTTAACGGTGTTGCGTTCTGCGGTACTCTTGCCGGACAGCTCTTTTTTGGATGGCTCGGTGACAAAATGGGCAGAAAACGTGTGTATGGCATGACCCTCATGCTCATGGTCATATGCTCAGTTGCCTCTGGCCTTTCCTTTGGCCATGAAGCGAAAGGTGTTATGGCCACTCTGTGCTTCTTCAGGTTCTGGCTGGGCTTTGGCATAGGTGGAGACTACCCGCTTTCTGCCACTATTATGTCTGAGTATGCTAATAAAAAGACTCGTGGAGCCTTCATTGCTGCAGTTTTTGCCATGCAAGGTTTTGGGATTTTAACTGGTGGAATCTTTGCAATTATAATTTCTGCCTCGTTTAAGGCTGCATTTCCTTCTCCAACTTATGAAATTGATCCAGTTGGGTCTACTGTTCCACAAGCTGATTTTGTTTGGCGGATAATTCTCATGTTTGGCGCCTTGCCGGCTGCTCTTACTTATTACTGGCGTATGAAGATGCCAGAGACTGCTCGTTACACAGCCTTGGTTGCCAAGAATGCGAAGAAGGCTGCAGCAGATATGTCTAAAGTTCTCCAGGTTGATCTAGAAGCAGAACAAGAGAAAGTTGAGTCGATCCAACGGCAAGGTAAAGATTTTGGGTTGTTCACCAAGCAGTTTCTTCGTCGCCATGGACTTCACTTGCTTGGGACCACTAGCACATGGTTCTTGTTGGACATCGCCTTCTACAGTCAGAATCTGTTTCAAAAGGACATCTTCAGTGCCATTGGGTGGATTCCTGCCGCCAAAACCATGAGTGCCCTTGAAGAGGTTTACAAAATTGCAAGGGCCCAAACTCTCATAGCCCTCTGCAGCACTGTTCCTGGGTACTGGTTCACAGTAGCGTTAATCGACAAGATGGGAAGATTTGCCATCCAATTGATGGGCTTCTTCTTTATGACCGTCTTCATGTTTGCCCTGGCTATACCTTACAATCACTGGACCCATAAAGAAAACCGAATTGGGTTCGTGGTGATGTACTCTCTCACATTCTTCTTCGCAAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCCGAGATTTTCCCTGCAAGGCTACGCTCCACATGCCATGGAATATCAGCAGCGGCTGGGAAGGCAGGGGCCATTGTTGGTGCCTTTGGCTTCTTGTATGCTGCTCAGAGCCAGGACAAGTCTAAGGTAGATAAAGGGTACCCAACCGGTATTGGTGTAAAAAATTCACTCATAGTTCTGGGTGTCGTCAACTTTCTGGGAATGTTATTTACCTTCTTGGTGCCCGAGTCCAAGGGAAAGTCACTAGAGGAAATGTCTGGTGAGAACGAAGAAGAAGAGAGTCCGTCGGAGGAGTCAAGACAGCAGGCTAGGACTGTTCCAGTTTAA 1611 0.4687 MAKNQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHSPGDAKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFGHEAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTGGIFAIIISASFKAAFPSPTYEIDPVGSTVPQADFVWRIILMFGALPAALTYYWRMKMPETARYTALVAKNAKKAAADMSKVLQVDLEAEQEKVESIQRQGKDFGLFTKQFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPAAKTMSALEEVYKIARAQTLIALCSTVPGYWFTVALIDKMGRFAIQLMGFFFMTVFMFALAIPYNHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDKSKVDKGYPTGIGVKNSLIVLGVVNFLGMLFTFLVPESKGKSLEEMSGENEEEESPSEESRQQARTVPV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0805 536 Coils Coil 258 278 - -
Vvi5g0805 536 CDD MFS_PhT 25 506 - -
Vvi5g0805 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 507 IPR020846 GO:0022857
Vvi5g0805 536 MobiDBLite consensus disorder prediction 509 536 - -
Vvi5g0805 536 NCBIfam phosphate:H+ symporter 11 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vvi5g0805 536 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
Vvi5g0805 536 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi5g0805 536 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Vvi5g0805 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 511 - -
Vvi5g0805 536 Gene3D MFS general substrate transporter like domains 20 268 IPR036259 -
Vvi5g0805 536 Gene3D MFS general substrate transporter like domains 272 531 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0805 Vvi-Chr5 7951257 7952867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0805 1 521 Inorganic Solute Cotransporters AT3G54700 84.261 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0805 K08176 - vvi:100257925 1025.39