Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0804 ATGGCGAGAGAACAATTGCAAGTGCTTAGTGCACTTGATTTGGCGAGAACCCAATTGTACCATTTTACTGCAATCGTGATTGCTGGAATGGGTTTCTTTACGGATGCTTACGATCTCTTTAGCATTTCTCTCGTCACGAAATTACTTGGCCGCATATACTACCATGTTGAGGGTGCACAAAAGCCTGGCACATTGCCTCCCAGTGTTTCAGCAGCAGTCAATGGCGTCGCCCTGTGCGGCACTCTGGCTGGCCAGCTCTTCTTCGGATGGCTTGGTGACAAAATGGGAAGGAAGAGCGTCTATGGCATAACCCTTATTCTCATGGTTGTTTGCTCCGTTGCCTCGGGGCTTTCTTTTGGAAATGAACGAAAGGGTGTCATGGCCACTCTTTGTTTCTTCCGATTCTGGCTTGGCTTTGGCATTGGTGGTGATTATCCCCTTTCCGCCACTATCATGTCGGAATATGCCAACAAGAAGACCCGCGGGGCCTTTATCGCTGCAGTGTTCGCCATGCAGGGGTTTGGAATTTTGGCTGGCGGGATAGTTTCACTCATTGTTTCAGCTGCATTTGATCACAGCTTCAACGCACCCTCCTATGAAAAAGACCCAGTTGGCTCCACTGTGAAACAAGCTGATTATGTTTGGCGAATTATTTTGATGTTTGGAGCTGCTCCTGCCGCTCTGACATACTACTGGCGGATGAAGATGCCTGAGACGGCTCGTTACACTGCGCTCGTTGCCAAGAATGCAAGGAAGGCAGCTGCTGACATGTCTAAGGTTTTGCAGGTGGACATCGAAGCCGAAGAGACCAAGGTGGAGAAGTTGGCAATGGAACCCGCCAATTCATTTGGTTTGTTTTCCAGACAATTCGCCCGTCGACACGGCCTTCATTTGTTAGGAACCACCAGTACTTGGTTTTTGTTGGACATTGCTTTCTACAGTCAGAATCTCTTCCAGAAGGACATCTTCAGTGCAATTGGATGGATTCCAAAAGCCGAGACCATGAATGCAATTCATGAAGTTTTTAGAATTGCCAAGGCTCAAACCTTAATTGCACTATGCAGTACTGTTCCAGGGTACTGGTGTACAGTGATTTTCATTGATTATATGGGGAGGTTTGCTATTCAACTGATGGGTTTCTTCTTCATGACCGTGTTCATGTTTGCGCTTGCTATTCCTTACCATCACTGGACTTTAGCGCCCAACCGAATCGGGTTCGTCGTAATGTACTCATTGACCTTCTTCTTTGCAAATTTTGGACCCAATGCAACCACCTTTGTAGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGATCAACTTGCCATGGTATATCTGCAGCATCTGGGAAGGCTGGTGCCATAATTGGGGCGTTTGGCTTCCTGTATGCTTCCCAAAGCCAAGACAAAACTCAGACGGATGCAGGCTACCCACCTGGTATTGGAATGAGAAATTCGCTCATTGTGCTTGGAGTAATCAACTTCTTAGGAATGCTCTTTACTTTCTTGGTCCCGGAACCAAAGGGAAAATCATTGGAGGAGATGACAGGGGAGAATGAGGATGATAGCCCTGAATTGGACATGCAGCCTCCTACTAATAGGACCGTTCCAGTGTAA 1614 0.4734 MAREQLQVLSALDLARTQLYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYHVEGAQKPGTLPPSVSAAVNGVALCGTLAGQLFFGWLGDKMGRKSVYGITLILMVVCSVASGLSFGNERKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSAAFDHSFNAPSYEKDPVGSTVKQADYVWRIILMFGAAPAALTYYWRMKMPETARYTALVAKNARKAAADMSKVLQVDIEAEETKVEKLAMEPANSFGLFSRQFARRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPKAETMNAIHEVFRIAKAQTLIALCSTVPGYWCTVIFIDYMGRFAIQLMGFFFMTVFMFALAIPYHHWTLAPNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIIGAFGFLYASQSQDKTQTDAGYPPGIGMRNSLIVLGVINFLGMLFTFLVPEPKGKSLEEMTGENEDDSPELDMQPPTNRTVPV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0804 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Vvi5g0804 537 Pfam Sugar (and other) transporter 25 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi5g0804 537 MobiDBLite consensus disorder prediction 510 537 - -
Vvi5g0804 537 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vvi5g0804 537 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Vvi5g0804 537 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Vvi5g0804 537 CDD MFS_PhT 25 507 - -
Vvi5g0804 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 506 - -
Vvi5g0804 537 FunFam Inorganic phosphate transporter 1-6 20 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0804 Vvi-Chr5 7931574 7933187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0804 1 516 Inorganic Solute Cotransporters AT2G38940 81.202 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0804 K08176 - vvi:100245922 1049.65