Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0763 ATGGCAAAGGAGGGAAGTAAACTTAGCAGCATTTACAGGAGGTTCAAGCCCCACCTCCTCATGGCTTTGGCTCAGTTTGGCTACACTTTTTTATATTTCATAACAGAAGCTTCCTTCAATCATGGGATGAACCCTCATGTCTACATAACCTATCGACATATTGTGGGTGGTTTGGTGACGTTTCCTTTTGCCTATTTTCTCGAAAGAAAAGTGAGGCCAAAGTTGACATTAGCTCTGTTTGTGGAGCTTTTTATTCTCTCCCTCCTGGGGGTGGGTTTGAGTCTCAACATGTATTTTGCAAGCTTGAGATACACTTCTCCAACCTTCATTGCATCTGTGGTCAACACCATAGCTTCTCTGACTTTTATAATTGCTGTTGTGCTCAGGATGGAAGTTCTGGATTTTCGAAATCCCCGTGGGATAGCAAAAGTTCTTGGAACCTTGGTCTCCTTGGCTGGTGTCATGACTATGACATTGTACAAGGGACCTATCATGAAAAGCCTTTGGGATCCTCTTATCCATATTCAGGGAAACACAACTATCCATGAGAACTGGTTGAAAGGTTCGATCCTGACTGTAGCAAGCTGCGTAACATGGTCCATCTGGTATATTATGCAGGCAATTACACTGAAAAGATATCCTGCACAACTGTCTCTGACTACATGGATGAGCTTTATTGGGGCAGCACAATCAGCTGTTTTCACAGTGTGTGTGGAACACAGTAGAGCGGCTTGGACCATTGGCTTCAACATTGATCTGTGGTCCACCGTATATGCTGGTGTAGTATGCTCCGGTTTAATAATCTTCGTTCAACTATGGTGCACAGAAGAAAAAGGACCTGTTTTTGTAACCATGTTTAATCCCCTTTCAACAGTATTAGTAGCAGTTTTAGCATATTTCGTCCTTGGAGAAAAACTTTACATGGGAAGCATACTAGGGGGAGCAATTGTCATAGTTGGATTATACTTGCTGTTGTGGGGTAAAGAAGGTGACCAAGAAGCTCAGGTCAAGTCACAAGAGGAATCTTATTCGGCCCGTGATTTGCAAGGGGGCCACAAGACACAAATAATTACCTCAGCTGAGGAGTTACAAAGAGCAGAACCTTAG 1107 0.4327 MAKEGSKLSSIYRRFKPHLLMALAQFGYTFLYFITEASFNHGMNPHVYITYRHIVGGLVTFPFAYFLERKVRPKLTLALFVELFILSLLGVGLSLNMYFASLRYTSPTFIASVVNTIASLTFIIAVVLRMEVLDFRNPRGIAKVLGTLVSLAGVMTMTLYKGPIMKSLWDPLIHIQGNTTIHENWLKGSILTVASCVTWSIWYIMQAITLKRYPAQLSLTTWMSFIGAAQSAVFTVCVEHSRAAWTIGFNIDLWSTVYAGVVCSGLIIFVQLWCTEEKGPVFVTMFNPLSTVLVAVLAYFVLGEKLYMGSILGGAIVIVGLYLLLWGKEGDQEAQVKSQEESYSARDLQGGHKTQIITSAEELQRAEP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0763 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Vvi5g0763 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 328 - -
Vvi5g0763 368 PANTHER WAT1-RELATED PROTEIN 17 338 IPR030184 GO:0016020|GO:0022857
Vvi5g0763 368 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020
Vvi5g0763 368 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0763 Vvi-Chr5 7495529 7497645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0763 3 356 Nodulin-like Gene Family AT5G07050 39.459 5.99e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0763 - - vvi:100242569 733.021