Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0725 ATGGCTCAACATGAGGGAGAAGCGTCGCCGAGGGTTCAGTACCCACTGAACTCCGAGGCGTATAGAATTCTTGATGAGATTGGTGTTGGCGTGAGCGCTATTGTTTACAAAGCTGAATGTCTTCCGATGAATTCAGCGTTGGTGGCGATCAAGTCTATCGATCTCGATCAATCTCGTGCTGATCTTGACAGTGTTCTACGTGAAGTGAAGACCATGTCGCTTCTCTCTCACCCCAACATTCTCAGAGCCCACTGTTCGTTTGCCGTCGATCATCGCCTTTGGGTGGTGATGCCTTTCATGTCTGCTGGGTCTCTGCAATCCATAATCGGTTCTTCTTTCCCTGATGGTTTACCAGAACCCTGCATTGCCATAGTTCTGAAAGAAACTTTGAACGCCTTATCGTATCTTCATGACCAAGGCCATCTTCATCGAGACATCAAGGCTGGTAATATTCTGGTGGATTCAACCGGCACAGTTAAGCTCGCTGATTTCGGGGTCTCGGCTTTGATTTACGAGTCGAACACCAGTTCTGGGACTTCGGGATCATCGTCATCGTCGTCCTTGATGCTCACCGAAGTTACGGGAACGCCGTACTGGATGGCCCCGGAGGTGATACACTCGCATACTGGGTACAGTTTGAAGGCTGATATATGGTCGTTTGGAATCACCGCATTAGAATTGGCTCATGGACGGCCACCTCTTTCTCACCTCCCACCTTCCAAGTCTCTGGTCATGAAGATCACAAAGCGCTTTCGATTCTCAGACTACGAACAGAGCAGGAGTGAACAAAGCCCGAAGTTCTCCAAGTCTTTCAAAGATATGGTAGCTTCTTGTCTCGATCAAGACCCGTCGAAAAGGCCCTCTGCAGACAAACTGCTGAAGCATCCATTCTTCAAGAACTGCAAGAATTCAGAGTTTCTGGTAAATAAAGTGCTGTCGGGGTTGGCAAGTGTTGAACAACGGTTTAAAGAAAGCAAGATTCGACGTTCTTTGTCTATCAAGAATACTGACGATGATGGTGATGAAGAAGAAAACGAAGAGTCTTCGATGGGAGAAATCATCAAACAGAGGAGGATCAGTGGGTGGAACTTTAAGGAGGACGTGTTAGAACTAGACCCGGTTTTCCCAAGCGAAACAGAAACACTTTCCCCTCCAAGACGGCAGGTCCGGTTTGCTGCTGAACCAATCATTCGGGATCCGAGCAATGAGAGTAGCTCAGACAATCCGGGTTCATCATCTCAAAGTGTGGAAGGGGTCCAAGAGCTGCACGATGAACACACAAATGAGCACGCTGGAAGTTTGGCTGTGGCAGTTCCGGAAGGGACTCAATTGAGTGCACAAATTGGGGTTTCGCTTGCGCATCTTGATCGTGACGGTGTAGTGAGAATGTTGAGGGGTCTGACTCGGAGTTTGTATGATCAGAGGAGGGCTGTGGGTTTAATGCTTACCATATTAACTGGGCAGGAGGAAGTAAGCAGAGAGGACCAGTTACTGCAGGAGAATGAGAGGCTGAAGATGGAACTGGAGCAAGAGAAGAAGAAGACCTCTGAAATGGAGATGGAGATGGAGTTTCTCAGTCTTCAGATCTCCCGTGGCTCCACCAGCGCTGCATCCAGGCAGAGTGGTGAGTGA 1632 0.4871 MAQHEGEASPRVQYPLNSEAYRILDEIGVGVSAIVYKAECLPMNSALVAIKSIDLDQSRADLDSVLREVKTMSLLSHPNILRAHCSFAVDHRLWVVMPFMSAGSLQSIIGSSFPDGLPEPCIAIVLKETLNALSYLHDQGHLHRDIKAGNILVDSTGTVKLADFGVSALIYESNTSSGTSGSSSSSSLMLTEVTGTPYWMAPEVIHSHTGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLVMKITKRFRFSDYEQSRSEQSPKFSKSFKDMVASCLDQDPSKRPSADKLLKHPFFKNCKNSEFLVNKVLSGLASVEQRFKESKIRRSLSIKNTDDDGDEEENEESSMGEIIKQRRISGWNFKEDVLELDPVFPSETETLSPPRRQVRFAAEPIIRDPSNESSSDNPGSSSQSVEGVQELHDEHTNEHAGSLAVAVPEGTQLSAQIGVSLAHLDRDGVVRMLRGLTRSLYDQRRAVGLMLTILTGQEEVSREDQLLQENERLKMELEQEKKKTSEMEMEMEFLSLQISRGSTSAASRQSGE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0725 543 Coils Coil 491 528 - -
Vvi5g0725 543 MobiDBLite consensus disorder prediction 376 430 - -
Vvi5g0725 543 Pfam Protein kinase domain 21 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi5g0725 543 SUPERFAMILY Protein kinase-like (PK-like) 13 305 IPR011009 -
Vvi5g0725 543 MobiDBLite consensus disorder prediction 399 418 - -
Vvi5g0725 543 FunFam Serine/threonine-protein kinase BLUS1 10 99 - -
Vvi5g0725 543 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 448 IPR047173 GO:0043539
Vvi5g0725 543 SMART serkin_6 21 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi5g0725 543 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Vvi5g0725 543 ProSiteProfiles Protein kinase domain profile. 21 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi5g0725 543 Gene3D Transferase(Phosphotransferase) domain 1 103 350 - -
Vvi5g0725 543 ProSitePatterns Protein kinases ATP-binding region signature. 27 51 IPR017441 GO:0005524
Vvi5g0725 543 FunFam Serine/threonine-protein kinase BLUS1 103 344 - -
Vvi5g0725 543 MobiDBLite consensus disorder prediction 333 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0725 Vvi-Chr5 7076729 7078360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0725 8 515 MAP Kinase Kinase Kinase Kinase AT4G14480 57.895 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vvi5g0725 Pkinase 1.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0725 K08835 - vvi:100240949 989.949