Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0722 ATGATCAGCATTTGGAATTTTCTCGGTCGAATTGGTGGAGGTTACTTGTCTGAGATGATAGTCAGGAACCATGCTTACCTACGGCCAGTGGCCATGGCAGCAGCCCAAGTTATAATGGCACTCGAACACTTATTCTTCTCTATGAGATGGCCTGGGGCAATGCACATTGGTACTCTATTGATTGGGCTTGGTTATGGGGCCCACTGGGCAATTGTACCGGCTGTTGCCTTTGAGTTGTTTGGCTTGAAGAACTTTGGGGCTTTATACAATTTTCTCACACTTGCAAACCCTGCAGGTTCACTAGTGTTTTCTGGTGTCATTGCTAGCAGTATAAATGATCATGAAACTGTGATTGCTGCAATGCGTCCGGATATCGATAACACCAATAAATATGTGAGGAACACGGCTGCCTTTAGTTTAGTTGCTTCCATATTAGGGATTCCTGCTCCCTTGCCACTCCTGAAAGTTGCGTGTCAGAGTAAGAAATCACGGCAAGCTTAG 501 0.4551 MISIWNFLGRIGGGYLSEMIVRNHAYLRPVAMAAAQVIMALEHLFFSMRWPGAMHIGTLLIGLGYGAHWAIVPAVAFELFGLKNFGALYNFLTLANPAGSLVFSGVIASSINDHETVIAAMRPDIDNTNKYVRNTAAFSLVASILGIPAPLPLLKVACQSKKSRQA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0722 166 Gene3D MFS general substrate transporter like domains 1 156 IPR036259 -
Vvi5g0722 166 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 117 - -
Vvi5g0722 166 SUPERFAMILY MFS general substrate transporter 2 147 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0722 Vvi-Chr5 7056672 7057172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0722 1 115 Nodulin-like Gene Family AT5G14120 80.870 2.37e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0722 - - vvi:100244537 211.846