Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0673 ATGGCGAGCTTGCGTATAACCACTATTACCTCGGAGTGGCGCGTGAGCTCGCTTCTCGCTCGCTTCCCTCCTTCCTTTTCTGCTCGTCGCTCCACTCCTCTCAGACCCTTTTCTGTCTCAGCTAGAAGCTTGTCAACCTCGTTGGTCATGGCTAGTTGTGGATCCAGCTCTATGAAGGAAGTGCCCCTGGGTATAGATCCAGCAATGGAGGAAACATATGCTTCACAGTCTAAGTTACTCAAAGAGTTCACTAGCATTGCCAGCATTGACAAGGCATGGACTTTCAAGCGTGACAGTGGAGGAAAAGGCTCCCAGGCAATGTTTTCAATTAGCCAAACAAATCTACTGGCCAACAAGAGGAGGAAACAAATTTTATCCGCTCATATCTCAAAAGAAAGTGACCATTCTGTAAACTTTCAATGGGCTCCATTTCCTATTGAGATGATGGGCGTGTCTACAATGGTTCCATCACCTTCAGGTTCAAAGCTTCTTGTAGTTCGAAATCCTGAAAATGAGTCTCCCACTCAATTTGAAATCTGGGGCCCATCTCAGTTAGAAAAGGAGTTCAATGTCCCTCAATCTGTTCATGGTTCAGTATATACTGATGGATGGTTTGAGGGAATTTCTTGGAACTCTGATGAAACTCTAATTGCTTATGTTGCTGAAGAGCCATCTCCCTCCAAGCCCACATTTGGTGGTTCAGGCTATAAGAAAGGAGATTCTGCAGACAAGGAGTCTGGCAGCTGGAAAGGTCTAGGAGAATGGGAGGAGCATTGGGGGGAAACTTATGCTGGGAAAAGGCAGCCTGCACTTTTTGTCATCAATATTGAGAGTGGCGAGGTGCATGCTGTTGAAGGAATTAGCAAATCCTTGAGTATAGGACAAGTTATATGGGCTCCATTGGCTGAAGGCTTCTCTCAATATTTGGTTTTTGTTGGGTGGTCATCAGAGACAAGGAAGCTTGGCATTAAGTATTGCTACAATCGCCCCTGTGCCTTGTATGCAGTCAGGGCTCCATTTTGTGAATCAAAAGCCAACGAACTTCAGTCCAAGAGCAATGTAAATGAAGATTCAACTGTGGTTAATCTAACTCAAAGCATTAGTAGTGCTTTCTTTCCAAGGTTCAGCCCAGATGGAAAGTTTCTTGTGTTTTTATCTGCAAAAAGTTCTGTGGATTCTGGGGCACATTCTGCAACTGATTCACTTCACAGAATTGCTTGGCCAACTGATGGGAAACCATGCCCATCTGCAAACATTGTTGATGTGATTCCTGTTATGATGTGTGCTGAGGATGGTTACTTCCCTGGGCTGTATTGTTCAAGCATCCTTAGTAACCCATGGCTTTCTGATGGATGCACTATGATTTTGTCTTCTGCCTGGCATAGCACTCAAGTAATTCTTTCTGTGGATGTGTTGAGTGGGAATGTGTCACATGTCAGCCCTAATGACTCAGGATTTTCATGGAATGTTCTTACATTGGATGGGGATAATATTGTTGCAGTATGTAGCAGTCCAATAGACATTCCTGAAATGAAGTATGGTTGGCTTGCTGAGAAGACAACTGCGAGTGATTCATGGAGTTGGCTAGATGTTTCAAATCCCATACCCAGATGCTCTGAGAAGATTAGATCCCTGCTCTCATCTCTTCAATTCAGCATAATGAAGATTCCAGTCAAGGATGTTTCTGATTGCCTCACAAAAGGTTCCTGCAAACCTTTTGAAGCTATATTTGTATCTTCCAACAAGAAGAATGATACATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCGCATTCTGTCTCATCGTCAAGCTTTTCAAAGAATTTGGCATTTCTCTCTTCACTAGGTTACAGCTTACTAATCGTAAATTACAGAGGTTCATTGGGATTTGGTGAGGAAGCATTGCAATCTCTTCCAGGGAAAATTGGGTCCCAGGACGTCAATGATGTTCTAACAGCAATAGATCATGTCATTGACATGGGGCTTTGTGATCCATCTAAAATAGCTGTAGTTGGTGGTTCCCATGGTGGCTTTCTAACAAGCCACTTGATTGGTCAGGCACCAGATAAGTTTGCAGTAGCTGCTGTGAGGAATCCTGTTTGTAACCTGGCCCTGATGGTGGGTACAACTGATATACCTGATTGGTGCTTTGTGGAGGCATATGGAAGTCAAGGAAAAAATAGCTTTACTGAAGCACCTTCAGCTGAACAACTGACTCTTCTTCACAGCAAATCTCCTGTATCACACATCCACAAGGTTAAAACGCCCACCCTTTTTCTTTTAGGTGCTCAGGATCTCCGTGTTCCAGTTTCTAATGGATTGCACTATGCAAGGGAATTAAAAGAAAAGGGAGTTGAGGTCAAAGTGATAATATTCCCCAATGATGTTCATGCGATTGAACGACCACAGTCAGACTTTGAAAGCTTTCTTAATATCGGAGTATGGTTCAAGAAGTATTGTGAATGA 2469 0.435 MASLRITTITSEWRVSSLLARFPPSFSARRSTPLRPFSVSARSLSTSLVMASCGSSSMKEVPLGIDPAMEETYASQSKLLKEFTSIASIDKAWTFKRDSGGKGSQAMFSISQTNLLANKRRKQILSAHISKESDHSVNFQWAPFPIEMMGVSTMVPSPSGSKLLVVRNPENESPTQFEIWGPSQLEKEFNVPQSVHGSVYTDGWFEGISWNSDETLIAYVAEEPSPSKPTFGGSGYKKGDSADKESGSWKGLGEWEEHWGETYAGKRQPALFVINIESGEVHAVEGISKSLSIGQVIWAPLAEGFSQYLVFVGWSSETRKLGIKYCYNRPCALYAVRAPFCESKANELQSKSNVNEDSTVVNLTQSISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIAWPTDGKPCPSANIVDVIPVMMCAEDGYFPGLYCSSILSNPWLSDGCTMILSSAWHSTQVILSVDVLSGNVSHVSPNDSGFSWNVLTLDGDNIVAVCSSPIDIPEMKYGWLAEKTTASDSWSWLDVSNPIPRCSEKIRSLLSSLQFSIMKIPVKDVSDCLTKGSCKPFEAIFVSSNKKNDTCDPLIVVLHGGPHSVSSSSFSKNLAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGKIGSQDVNDVLTAIDHVIDMGLCDPSKIAVVGGSHGGFLTSHLIGQAPDKFAVAAVRNPVCNLALMVGTTDIPDWCFVEAYGSQGKNSFTEAPSAEQLTLLHSKSPVSHIHKVKTPTLFLLGAQDLRVPVSNGLHYARELKEKGVEVKVIIFPNDVHAIERPQSDFESFLNIGVWFKKYCE* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0673 822 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 69 821 - -
Vvi5g0673 822 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 69 342 IPR045550 -
Vvi5g0673 822 Pfam Prolyl oligopeptidase family 605 820 IPR001375 GO:0006508|GO:0008236
Vvi5g0673 822 MobiDBLite consensus disorder prediction 227 249 - -
Vvi5g0673 822 SUPERFAMILY alpha/beta-Hydrolases 577 820 IPR029058 -
Vvi5g0673 822 ProSitePatterns Prolyl endopeptidase family serine active site. 650 680 IPR002471 GO:0004252|GO:0006508
Vvi5g0673 822 FunFam Acylamino-acid-releasing enzyme 562 821 - -
Vvi5g0673 822 Gene3D alpha/beta hydrolase 570 820 IPR029058 -
Vvi5g0673 822 SUPERFAMILY DPP6 N-terminal domain-like 149 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0673 Vvi-Chr5 6397556 6408223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0673 589 805 Carbohydrate Esterase AT5G36210 24.424 3.80e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0673 K01303 - vvi:100242540 1653.26