Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0621 ATGAATCCCGGCGTCACCACTCTCCGCTCTATACTGGACAAACCCCTTCACGAACTCACCGAAGAAGACATTTCTCAGCTCACTCGTGAAGATTGTCGCAAATACCTCAAAGAAAAAGGAATGCGTCGTCCTTCCTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTCGCTTAAATCGTTGCTCGAAACCAGTGAGGGCAGCGGTGCCGGAGTTTTGAGGAAGATCACCGATTCACCGCCGGCGGAAAATCTACCTCCGGTTACCTCCAATTCAGCTGATTCAGGCAAGGAGCTGAGTGCTGATATCCAGATCTCAGTATCAGCTGATGAACTGGTTCCCCTTCCGCCAAAAGATCATCATCCAGAATCCACCCCTTCTGGCGAATTAGCCAGCCGGCCTCCAGAGGCAGACACCAAGCATACTTGTCCCAGAAGTCCAGGTGCAACAAATTGTTTGGTTGGGCAGATGACAATTTTCTACTGTGGAAAGGTGAATGTGTATGATGGAGTTCCAGATGATAAGGCACAAGCAATCATGCATCTTGCAGCAAGCCCATTCCATTTGCCTTCAGATGACCCCTTTAGTGGTGCTGCTATGCTTTGCTCCTCTCCATGCCATTTGCATACTGCCAATGTTAAACATGGCCATATTCCTCCTCGAGCCATGGTTTCTCAGACTATGCAAACAGAGAAATTTACTGAATATTCTCAACAGTACAGAGAAGAAGTGAACTTTACCCGTGGACATGATGTTGAAGGTCAGGTTGACAGAAAATTATCATTGCAAAGATATTTCGAAAAGCGAAAAGACAGGTACCTTAATCAACCAAGATATCATTTATCAGATGACACCAATAACCTTATATTTTATTTACTCATTTCTTGCTTTCAAGTCATTGCCTTTTTTTTTATCTTCTTTTTGCTAATGTGCCTATTTGGGGTAGATTTAAGAGCAGGAAAAAAATAG 969 0.4438 MNPGVTTLRSILDKPLHELTEEDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKSLLETSEGSGAGVLRKITDSPPAENLPPVTSNSADSGKELSADIQISVSADELVPLPPKDHHPESTPSGELASRPPEADTKHTCPRSPGATNCLVGQMTIFYCGKVNVYDGVPDDKAQAIMHLAASPFHLPSDDPFSGAAMLCSSPCHLHTANVKHGHIPPRAMVSQTMQTEKFTEYSQQYREEVNFTRGHDVEGQVDRKLSLQRYFEKRKDRYLNQPRYHLSDDTNNLIFYLLISCFQVIAFFFIFFLLMCLFGVDLRAGKK* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0621 322 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 277 IPR040390 -
Vvi5g0621 322 MobiDBLite consensus disorder prediction 83 98 - -
Vvi5g0621 322 Pfam Jas motif 256 275 IPR018467 -
Vvi5g0621 322 Pfam tify domain 156 184 IPR010399 -
Vvi5g0621 322 MobiDBLite consensus disorder prediction 113 148 - -
Vvi5g0621 322 ProSiteProfiles Tify domain profile. 150 185 IPR010399 -
Vvi5g0621 322 MobiDBLite consensus disorder prediction 72 98 - -
Vvi5g0621 322 SMART tify_2 150 185 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0621 1 292 Tify Gene Family AT4G14720 46.667 1.19e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vvi5g0621 tify 4.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0621 - - vvi:100242586 559.681