Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0614 ATGGGGAAGACAGGCAAATGGATTAGAAACTTCTTGACAGGGAAGAAAGATAAGGAGAGAGACAGAGAGAAAGACAAGGAAAAGCTTAACTCAATTGCCATTGAGAATCCAAGCACCCCCATTCTTATCCCACCAACAACTCCCAAAGAAAAACGACGATGGAGTTTTCGCAGATCGTCGGCAACATCAGCAGGTCACAAGGACTCAATCTCTGTGGACACAATTGCCACTACACCGCCGGCAGGACAGCCAATATTGGATTCTGAAAATGAGCAGAAAAAGCATGCCATGGCAGTGGCTGCAGCTACTGCAGCAGCTGCTGGTGCAGCTGTGGCAGCTGCACAAGCTGCTGCTGCTGTGATCCGACTAACAGCTGCTGCCACCGGGAGAGCAGGAGCAATTGAGGAGGCTGCTGCTGTTAAGATTCAAGCTGCGTTTCGTGCTCATTTGGCAAGAAAAGCACTGTGTGCATTAAAAGGATTAGTGAAGTTGCAGGCACTGGTAAGGGGTAACCTGGTGAGAAAACAGGCCACTGCTACACTCCGGTGCATGCAGGCACTGGTGACAGTTCAGGCTAGAGCTCGAGTTCAGAGGATCCGGATGACTGAAGAAACAAAGCCGGTTAATCAGAGGCAATTGACTCAAAGAAAATCCACACAGGACAATCGGTTCAGGAACACAAATCATGATAAAGATAGAGGCATGGAGGAGAACATTAAGATAGTGGAGATGGACCAAGGGGAGTCAAAGGGAAGTTCAAAAGGAAGGAATAGCTATTCAAACCATGCACAAACTGAACGAGCAGAGCCCAGATTCTCCACAAACTATGCAACAAATCATGCATACTCAAAACAAGATAATCAACAGATCTCACCAGCCCCATCAGCCTTGACTGACATGAGTCCAAGAGCCTGCAGTGGGCATTTTGAGGAATATTGCTTCACCACAACGCAAAGCAGCCCCCAGTGCTACTCAGCTGTGTCTAAACCTGATTGCACAGGACTTCCTTTTGCTTTCCCTCAGACAGATTGTGCAGAATCTTTGTCCTATGATTACCCATTCTTCCCCAATTACATGGCTAACACAGAATCTTCAAAAGCCAAAGTGCGATCACATAGTGCACCAAAGCAACGGCCAGAATCCTTTGAGAGGCAACCAAGCCGGCGGAGAGCATCAATGGAAGGAAGAAACATCCCAAGGGCCATGCGGATGCAAAGGTCATCTTCGCATGTAGGCTCCACTGCTCAAGGATACCAATATCCCTGGTCGATCAAACTTGACAGATCAACAGTTTCCCTTAAAGACAGTGAGTGCGGATCTACCAGTACAGTGCTCACAAATACCAACTACTGCAAATCCCTCTTTGCATATGATCTGCAGGGGGATAGGTATTAA 1395 0.476 MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSSATSAGHKDSISVDTIATTPPAGQPILDSENEQKKHAMAVAAATAAAAGAAVAAAQAAAAVIRLTAAATGRAGAIEEAAAVKIQAAFRAHLARKALCALKGLVKLQALVRGNLVRKQATATLRCMQALVTVQARARVQRIRMTEETKPVNQRQLTQRKSTQDNRFRNTNHDKDRGMEENIKIVEMDQGESKGSSKGRNSYSNHAQTERAEPRFSTNYATNHAYSKQDNQQISPAPSALTDMSPRACSGHFEEYCFTTTQSSPQCYSAVSKPDCTGLPFAFPQTDCAESLSYDYPFFPNYMANTESSKAKVRSHSAPKQRPESFERQPSRRRASMEGRNIPRAMRMQRSSSHVGSTAQGYQYPWSIKLDRSTVSLKDSECGSTSTVLTNTNYCKSLFAYDLQGDRY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0614 464 MobiDBLite consensus disorder prediction 1 79 - -
Vvi5g0614 464 PANTHER IQ-DOMAIN 5-RELATED 1 395 - -
Vvi5g0614 464 Pfam Protein of unknown function (DUF4005) 311 396 IPR025064 -
Vvi5g0614 464 Pfam IQ calmodulin-binding motif 162 176 IPR000048 GO:0005515
Vvi5g0614 464 Pfam IQ calmodulin-binding motif 137 155 IPR000048 GO:0005515
Vvi5g0614 464 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Vvi5g0614 464 MobiDBLite consensus disorder prediction 58 79 - -
Vvi5g0614 464 MobiDBLite consensus disorder prediction 369 396 - -
Vvi5g0614 464 SMART iq_5 157 178 IPR000048 GO:0005515
Vvi5g0614 464 SMART iq_5 134 156 IPR000048 GO:0005515
Vvi5g0614 464 MobiDBLite consensus disorder prediction 10 31 - -
Vvi5g0614 464 Gene3D - 135 186 - -
Vvi5g0614 464 MobiDBLite consensus disorder prediction 206 221 - -
Vvi5g0614 464 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Vvi5g0614 464 MobiDBLite consensus disorder prediction 201 272 - -
Vvi5g0614 464 MobiDBLite consensus disorder prediction 251 272 - -
Vvi5g0614 464 MobiDBLite consensus disorder prediction 366 414 - -
Vvi5g0614 464 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0614 Vvi-Chr5 5650784 5652976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0614 1 450 IQD Protein Family AT4G14750 46.778 7.84e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0614 - - vvi:100244856 855.514